Score E
Sequences producing significant alignments: (bits) Value
gi|7706343|ref|NP_057146.1| CGI-128 protein [Homo sapiens] ... 238 6e-69
gi|12834736|dbj|BAB23024.1| (AK003830) putative [Mus musculus] 236 2e-68
gi|7294794|gb|AAF50128.1| (AE003547) CG7949 gene product [D... 180 7e-49
gi|7503486|pir||T22242 hypothetical protein F45G2.10 - Caen... 154 3e-38
gi|12325332|gb|AAG52613.1|AC016447_22 (AC016447) unknown pr... 139 1e-32
gi|7490270|pir||T37683 conserved hypothetical protein SPAC1... 124 6e-28
gi|6321914|ref|NP_011990.1| Yhr122wp [Saccharomyces cerevis... 124 6e-28
gi|14149934|ref|NP_115607.1| hypothetical protein FLJ22875 ... 116 6e-27
gi|13386128|ref|NP_080911.1| RIKEN cDNA 5730536A07 gene [Mu... 114 2e-26
gi|12834801|dbj|BAB23049.1| (AK003870) putative [Mus musculus] 114 4e-26
gi|6478928|gb|AAF14033.1|AC011436_17 (AC011436) hypothetica... 114 5e-25
gi|7302339|gb|AAF57428.1| (AE003791) CG10404 gene product [... 109 7e-24
gi|12007327|gb|AAG45140.1|AF310896_2 (AF310896) unknown [Di... 92 3e-18
gi|5231154|gb|AAD41096.1|AF156693_1 (AF156693) CBHI [Volvar... 35 0.37
gi|1709101|sp|P53383|MRP_SYNY3 MRP PROTEIN HOMOLOG >gi|7446... 35 0.37
gi|4559308|gb|AAD22978.1|AF127031_1 (AF127031) cation chann... 34 0.63
gi|7492426|pir||T41672 probable b-zip transcription factor ... 33 1.1
gi|7298454|gb|AAF53675.1| (AE003659) CG10231 gene product [... 33 1.1
gi|129320|sp|P25096|P21_SOYBN P21 PROTEIN >gi|99943|pir||A3... 33 1.8
gi|444321|prf||1906370A protein P21 [Glycine max] 33 1.8
gi|14601761|ref|NP_148302.1| hypothetical protein [Aeropyru... 32 2.4
gi|13486780|dbj|BAB40013.1| (AP003021) hypothetical protein... 32 2.4
gi|14548279|sp|Q9QX01|TRP1_RAT SHORT TRANSIENT RECEPTOR POT... 32 2.4
gi|7303616|gb|AAF58668.1| (AE003826) CG13207 gene product [... 32 2.4
gi|6755885|ref|NP_035773.1| transient receptor protein 1 [M... 32 3.1
gi|1351302|sp|P48995|TRP1_HUMAN SHORT TRANSIENT RECEPTOR PO... 32 3.1
gi|14548281|sp|O18784|TRP1_BOVIN SHORT TRANSIENT RECEPTOR P... 32 3.1
gi|4507685|ref|NP_003295.1| transient receptor potential ch... 32 3.1
gi|14548294|sp|Q9TUN9|TRP1_RABIT SHORT TRANSIENT RECEPTOR P... 32 3.1
gi|2331277|gb|AAC48772.1| (AF012901) trp-1b [Bos taurus] 32 3.1
gi|2136328|pir||I38361 TRPC1 protein - human 32 3.1
gi|2052504|gb|AAC53162.1| (U95167) Mtrp1 beta [Mus musculus... 32 3.1
gi|7300675|gb|AAF55823.1| (AE003732) CG5630 gene product [D... 31 7.0
gi|13421981|gb|AAK22733.1| (AE005750) conserved hypothetica... 30 9.1
gi|6323885|ref|NP_013956.1| Protein required for processing... 30 9.1
Alignments
>gi|7706343|ref|NP_057146.1| CGI-128 protein [Homo sapiens]
gi|13647313|ref|XP_007862.3| CGI-128 protein [Homo sapiens]
gi|14785642|ref|XP_043821.1| CGI-128 protein [Homo sapiens]
gi|14785644|ref|XP_043822.1| CGI-128 protein [Homo sapiens]
gi|4929725|gb|AAD34123.1|AF151886_1 (AF151886) CGI-128 protein [Homo sapiens]
gi|6841458|gb|AAF29082.1|AF161467_1 (AF161467) HSPC118 [Homo sapiens]
gi|12804621|gb|AAH01733.1|AAH01733 (BC001733) CGI-128 protein [Homo sapiens]
gi|13477133|gb|AAH05023.1|AAH05023 (BC005023) CGI-128 protein [Homo sapiens]
Length = 163
Score = 238 bits (607), Expect(2) = 6e-69
Identities = 120/120 (100%), Positives = 120/120 (100%)
Frame = -1
Query: 576 SGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTV 397
SGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTV
Sbjct: 23 SGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTV 82
Query: 396 AVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 217
AVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV
Sbjct: 83 AVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 142
Score = 43.9 bits (102), Expect(2) = 6e-69
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCLSARS 155
AAALENTHLLEVVNQCLSARS
Sbjct: 143 AAALENTHLLEVVNQCLSARS 163
>gi|12834736|dbj|BAB23024.1| (AK003830) putative [Mus musculus]
Length = 163
Score = 236 bits (603), Expect(2) = 2e-68
Identities = 118/120 (98%), Positives = 120/120 (99%)
Frame = -1
Query: 576 SGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTV 397
SGERPVTAGEEDE+VPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVR+QVSDPESTV
Sbjct: 23 SGERPVTAGEEDEEVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRIQVSDPESTV 82
Query: 396 AVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 217
AVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV
Sbjct: 83 AVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 142
Score = 43.9 bits (102), Expect(2) = 2e-68
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCLSARS 155
AAALENTHLLEVVNQCLSARS
Sbjct: 143 AAALENTHLLEVVNQCLSARS 163
>gi|7294794|gb|AAF50128.1| (AE003547) CG7949 gene product [Drosophila melanogaster]
Length = 156
Score = 180 bits (456), Expect(2) = 7e-49
Identities = 88/118 (74%), Positives = 104/118 (87%)
Frame = -1
Query: 570 ERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTVAV 391
ER +TA EEDE VPD D REIFDLIR+INDPEHPLTLEEL+VV++ ++++D +++V +
Sbjct: 18 ERVLTANEEDENVPDPFDKREIFDLIRNINDPEHPLTLEELHVVQEDLIRINDSQNSVHI 77
Query: 390 AFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 217
+FTPTIPHCSMATLIGLSI+VKLLRSLP RFK+ V ITPGTHASE AVNKQLADKERV
Sbjct: 78 SFTPTIPHCSMATLIGLSIRVKLLRSLPPRFKVTVEITPGTHASELAVNKQLADKERV 135
Score = 35.0 bits (79), Expect(2) = 7e-49
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCLSAR 158
AAALEN HL EV+NQC++A+
Sbjct: 136 AAALENNHLAEVINQCIAAK 155
>gi|7503486|pir||T22242 hypothetical protein F45G2.10 - Caenorhabditis elegans
gi|3877252|emb|CAB07619.1| (Z93382) F45G2.10 [Caenorhabditis elegans]
Length = 160
Score = 154 bits (390), Expect(2) = 3e-38
Identities = 77/119 (64%), Positives = 96/119 (79%), Gaps = 2/119 (1%)
Frame = -1
Query: 567 RPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQ--VRVQVSDPESTVA 394
RPVT E DE V D ID+ EIFDLIR INDPEHP TLE+LNVV++ ++V + + E+ V
Sbjct: 21 RPVTGTERDESVEDPIDSWEIFDLIRDINDPEHPYTLEQLNVVQEELIKVFIDEEETFVK 80
Query: 393 VAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 217
V FTPTIPHCSMATLIGL+I+VKLLRSL + K+ V ITPG+H++E ++N+QLADKERV
Sbjct: 81 VNFTPTIPHCSMATLIGLAIRVKLLRSLHPKVKVSVSITPGSHSTEESINRQLADKERV 139
Score = 25.0 bits (53), Expect(2) = 3e-38
Identities = 10/17 (58%), Positives = 13/17 (75%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCL 167
AAA+EN L+ VN+CL
Sbjct: 140 AAAMENQGLMHAVNECL 156
>gi|12325332|gb|AAG52613.1|AC016447_22 (AC016447) unknown protein; 44053-42626 [Arabidopsis thaliana]
Length = 159
Score = 139 bits (351), Expect = 1e-32
Identities = 71/133 (53%), Positives = 91/133 (68%), Gaps = 2/133 (1%)
Frame = -1
Query: 543 DEQVPDSIDAREIFDLIRSIN--DPEHPLTLEELNVVEQVRVQVSDPESTVAVAFTPTIP 370
DE P+ ID EIFD++ S N DPEHP TLE+L VV + V+V D S V V FTPT+
Sbjct: 28 DELTPEPIDQLEIFDILSSSNIKDPEHPNTLEDLRVVTEDSVEVDDENSYVRVTFTPTVE 87
Query: 369 HCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERVQLPWRTPTS 190
HCSMAT+IGL ++VKLLRSLP R+K+D+ + PG+HA+E A+NKQL DKERV P
Sbjct: 88 HCSMATVIGLCVRVKLLRSLPSRYKIDIRVAPGSHATEDALNKQLNDKERVAAALENPNL 147
Query: 189 WRL*ISACQPAPE 151
+ + C P+ E
Sbjct: 148 VEM-VDECLPSEE 159
>gi|7490270|pir||T37683 conserved hypothetical protein SPAC144.16 - fission yeast
(Schizosaccharomyces pombe)
gi|6138907|emb|CAB59696.1| (AL132675) conserved hypothetical protein [Schizosaccharomyces
pombe]
Length = 179
Score = 124 bits (310), Expect = 6e-28
Identities = 64/107 (59%), Positives = 78/107 (72%), Gaps = 3/107 (2%)
Frame = -1
Query: 528 DSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDP---ESTVAVAFTPTIPHCSM 358
D ID +EI+DL+ INDPEHPLTL +L+VV+ ++V D +S + V TPTIPHCSM
Sbjct: 52 DPIDPQEIYDLLAKINDPEHPLTLAQLSVVKLEDIEVVDNVEGDSYITVHITPTIPHCSM 111
Query: 357 ATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 217
TLIGL I+V+L R LP RF +DV + GTHASE VNKQL DKERV
Sbjct: 112 CTLIGLCIRVRLERCLPPRFHVDVKVKKGTHASESQVNKQLNDKERV 158
>gi|6321914|ref|NP_011990.1| Yhr122wp [Saccharomyces cerevisiae]
gi|731709|sp|P38829|YHS2_YEAST HYPOTHETICAL 25.7 KD PROTEIN IN MSH1-EPT1 INTERGENIC REGION
gi|626648|pir||S48966 hypothetical protein YHR122w - yeast (Saccharomyces cerevisiae)
gi|500677|gb|AAB68410.1|AAB68410 (U10398) Yhr122wp [Saccharomyces cerevisiae]
Length = 231
Score = 124 bits (310), Expect = 6e-28
Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 5/125 (4%)
Frame = -1
Query: 576 SGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPEST- 400
S + V G ++E+ PD IDA+EI+DLI I+DPEHPL+L +L+VV + V D +
Sbjct: 86 SEDESVAGGGKEEEEPDLIDAQEIYDLIAHISDPEHPLSLGQLSVVNLEDIDVHDSGNQN 145
Query: 399 ----VAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLA 232
V + TPTI HCS+ATLIGL I+V+L RSLP RF++ + + GTH SE+ VNKQL
Sbjct: 146 EMAEVVIKITPTITHCSLATLIGLGIRVRLERSLPPRFRITILLKKGTHDSENQVNKQLN 205
Query: 231 DKERV 217
DKERV
Sbjct: 206 DKERV 210
>gi|14149934|ref|NP_115607.1| hypothetical protein FLJ22875 [Homo sapiens]
gi|14755184|ref|XP_042243.1| hypothetical protein FLJ22875 [Homo sapiens]
gi|14755190|ref|XP_042242.1| hypothetical protein FLJ22875 [Homo sapiens]
gi|10439406|dbj|BAB15496.1| (AK026528) unnamed protein product [Homo sapiens]
gi|14250790|gb|AAH08865.1|AAH08865 (BC008865) Unknown (protein for MGC:14881) [Homo sapiens]
Length = 160
Score = 116 bits (290), Expect(2) = 6e-27
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = -1
Query: 516 AREIFDLIRSINDPEHPLTLEELNVVEQVRVQV---SDPESTVAVAFTPTIPHCSMATLI 346
A E++DLIR+I DPE P TLEEL VV + V+V ++ E V + FTPT+PHCS+ATLI
Sbjct: 37 ALEVYDLIRTIRDPEKPNTLEELEVVSESCVEVQEINEEEYLVIIRFTPTVPHCSLATLI 96
Query: 345 GLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERVQLPWRTP 196
GL ++VKL R LP + K++++I+ GTH++E +NKQ+ DKERV P
Sbjct: 97 GLCLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENP 146
Score = 25.4 bits (54), Expect(2) = 6e-27
Identities = 10/17 (58%), Positives = 14/17 (81%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCL 167
AAA+EN +L E+V QC+
Sbjct: 140 AAAMENPNLREIVEQCV 156
>gi|13386128|ref|NP_080911.1| RIKEN cDNA 5730536A07 gene [Mus musculus]
gi|12832857|dbj|BAB22285.1| (AK002690) putative [Mus musculus]
gi|13543144|gb|AAH05745.1|AAH05745 (BC005745) RIKEN cDNA 5730536A07 gene [Mus musculus]
Length = 160
Score = 114 bits (286), Expect(2) = 2e-26
Identities = 56/110 (50%), Positives = 79/110 (70%), Gaps = 3/110 (2%)
Frame = -1
Query: 516 AREIFDLIRSINDPEHPLTLEELNVVEQVRVQV---SDPESTVAVAFTPTIPHCSMATLI 346
A E++DLIR+I DPE P TLEEL VV + V+V ++ + V + FTPT+PHCS+ATLI
Sbjct: 37 ALEVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIKFTPTVPHCSLATLI 96
Query: 345 GLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERVQLPWRTP 196
GL ++VKL R LP + K++++I+ GTH++E +NKQ+ DKERV P
Sbjct: 97 GLCLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENP 146
Score = 25.4 bits (54), Expect(2) = 2e-26
Identities = 10/17 (58%), Positives = 14/17 (81%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCL 167
AAA+EN +L E+V QC+
Sbjct: 140 AAAMENPNLREIVEQCV 156
>gi|12834801|dbj|BAB23049.1| (AK003870) putative [Mus musculus]
Length = 128
Score = 114 bits (286), Expect(2) = 4e-26
Identities = 56/110 (50%), Positives = 79/110 (70%), Gaps = 3/110 (2%)
Frame = -1
Query: 516 AREIFDLIRSINDPEHPLTLEELNVVEQVRVQV---SDPESTVAVAFTPTIPHCSMATLI 346
A E++DLIR+I DPE P TLEEL VV + V+V ++ + V + FTPT+PHCS+ATLI
Sbjct: 5 ALEVYDLIRTIRDPEKPNTLEELEVVTESCVEVQEINEDDYLVIIKFTPTVPHCSLATLI 64
Query: 345 GLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERVQLPWRTP 196
GL ++VKL R LP + K++++I+ GTH++E +NKQ+ DKERV P
Sbjct: 65 GLCLRVKLQRCLPFKHKLEIYISEGTHSTEEDINKQINDKERVAASMENP 114
Score = 24.3 bits (51), Expect(2) = 4e-26
Identities = 9/17 (52%), Positives = 14/17 (81%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCL 167
AA++EN +L E+V QC+
Sbjct: 108 AASMENPNLREIVEQCV 124
>gi|6478928|gb|AAF14033.1|AC011436_17 (AC011436) hypothetical protein [Arabidopsis thaliana]
Length = 156
Score = 114 bits (285), Expect = 5e-25
Identities = 57/101 (56%), Positives = 71/101 (69%), Gaps = 1/101 (0%)
Frame = -1
Query: 495 IRSINDPEHP-LTLEELNVVEQVRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLL 319
IR I DPEHP L+LE+LNV+ + V+V D +S V + FTPT+PHC + T IGL I VKL+
Sbjct: 43 IRDIKDPEHPELSLEDLNVLTEESVEVDDHKSYVRITFTPTLPHCHLPTHIGLCILVKLV 102
Query: 318 RSLPQRFKMDVHITPGTHASEHAVNKQLADKERVQLPWRTP 196
+SLP RFK+DV + PG+H E VNKQL DKERV P
Sbjct: 103 QSLPARFKVDVRVAPGSHDKETTVNKQLGDKERVTAALENP 143
>gi|7302339|gb|AAF57428.1| (AE003791) CG10404 gene product [Drosophila melanogaster]
Length = 218
Score = 109 bits (272), Expect(2) = 7e-24
Identities = 53/108 (49%), Positives = 70/108 (64%), Gaps = 4/108 (3%)
Frame = -1
Query: 507 IFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPE----STVAVAFTPTIPHCSMATLIGL 340
I+DL+R I DPE P TLE+LNVV + + V P S V + F PT+PHCS+ATLIGL
Sbjct: 97 IYDLLRGIRDPEKPCTLEDLNVVYEDGIFVMPPTRSNVSVVRIEFNPTVPHCSLATLIGL 156
Query: 339 SIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERVQLPWRTP 196
I+VK+ R LP K+D++I G H +E +NKQ+ DKER+ P
Sbjct: 157 CIRVKVERGLPHNIKLDIYIKKGAHQTEEEINKQINDKERIAAAMENP 204
Score = 21.9 bits (45), Expect(2) = 7e-24
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 217 AAALENTHLLEVVNQCL 167
AAA+EN +L ++V C+
Sbjct: 198 AAAMENPNLRDLVENCI 214
>gi|12007327|gb|AAG45140.1|AF310896_2 (AF310896) unknown [Dictyostelium discoideum]
Length = 150
Score = 91.7 bits (226), Expect = 3e-18
Identities = 49/133 (36%), Positives = 71/133 (52%), Gaps = 19/133 (14%)
Frame = -1
Query: 522 IDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPEST------------------- 400
ID ++FD+IR I DPE P TLEEL VV + + V D
Sbjct: 8 IDKIDVFDIIRHIKDPEFPKTLEELKVVNEDWITVIDNNDINDSDDINNNNNENYKGYCF 67
Query: 399 VAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKER 220
+ + F PT+PHC +A I L I+ K+ LP+R K++++I GTH +E +NKQ+ DKER
Sbjct: 68 IKILFQPTVPHCHLAPTIALCIREKIKEYLPKRSKIEIYIKKGTHQTEDEINKQINDKER 127
Query: 219 VQLPWRTPTSWRL 181
+ P ++L
Sbjct: 128 IIAALENPEIFQL 140
>gi|5231154|gb|AAD41096.1|AF156693_1 (AF156693) CBHI [Volvariella volvacea]
Length = 536
Score = 35.0 bits (79), Expect = 0.37
Identities = 18/37 (48%), Positives = 22/37 (58%)
Frame = -2
Query: 371 RTAAWPPLLVCPSRSSFCAPFLSVSRWTCTLLRGPMP 261
RTAAW P++VC S P +S R T LLR P+P
Sbjct: 163 RTAAWMPMVVCAS-----TPLISTRRSTARLLRLPVP 194
>gi|1709101|sp|P53383|MRP_SYNY3 MRP PROTEIN HOMOLOG
gi|7446821|pir||S74379 probable ATPase - Synechocystis sp. (strain PCC 6803)
gi|1001155|dbj|BAA10297.1| (D64001) put. ATPase [Synechocystis sp. PCC 6803]
Length = 353
Score = 35.0 bits (79), Expect = 0.37
Identities = 26/97 (26%), Positives = 46/97 (46%)
Frame = -1
Query: 507 IFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKV 328
+ ++R + DPE +L ELN++ V + TV+ T P C + I +
Sbjct: 7 VLTVLRPVQDPELQKSLVELNMIRDVAI----AGGTVSFTLVLTTPACPLREFIVEDCE- 61
Query: 327 KLLRSLPQRFKMDVHITPGTHASEHAVNKQLADKERV 217
K +++LP K++V +T +E K L D++ V
Sbjct: 62 KAVKTLPGVEKVEVKVT-----AETPQQKSLPDRQSV 93
>gi|4559308|gb|AAD22978.1|AF127031_1 (AF127031) cation channel TRP-1 [Xenopus laevis]
gi|4633140|gb|AAD26639.1|AF113508_1 (AF113508) transient receptor potential protein [Xenopus laevis]
Length = 778
Score = 34.3 bits (77), Expect = 0.63
Identities = 14/38 (36%), Positives = 21/38 (54%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C F S+S+W C+
Sbjct: 652 LWLSYFDDKCTLPPPFNIVPSPKTICYLFNSISKWICS 689
>gi|7492426|pir||T41672 probable b-zip transcription factor - fission yeast
(Schizosaccharomyces pombe)
gi|3560233|emb|CAA20701.1| (AL031530) putative b-zip transcription factor [Schizosaccharomyces
pombe]
Length = 967
Score = 33.5 bits (75), Expect = 1.1
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -1
Query: 549 EEDEQVPDSIDAREIFDLIRSINDPEHPLTLEEL-NVVEQVRVQVSDPES 403
EE+ ++P ++ EI D RS+NDP L+L + + E R+ SD ++
Sbjct: 642 EENSELPPPLEPAEIGDPFRSVNDPRRVLSLPHMASADEDHRIPASDNQN 691
>gi|7298454|gb|AAF53675.1| (AE003659) CG10231 gene product [Drosophila melanogaster]
Length = 1284
Score = 33.5 bits (75), Expect = 1.1
Identities = 18/44 (40%), Positives = 25/44 (55%), Gaps = 2/44 (4%)
Frame = +1
Query: 274 RSNVHVHLETLRKGAQKLDLDGQTNKGGHAAVRNGW--CESHSH 399
RS + V + +GAQ+LDLD +T G HAA+ +HSH
Sbjct: 1120 RSGLQVRKTSSLRGAQELDLDSKTRNGTHAALCKSTPVINNHSH 1163
>gi|129320|sp|P25096|P21_SOYBN P21 PROTEIN
gi|99943|pir||A33176 P21 protein - soybean
Length = 202
Score = 32.7 bits (73), Expect = 1.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 91 SPGRSWDQDTSMQAEGSKARLRSGLTGTDSQPPRGGCSPGQLHPLLICK 237
+PG+SW D +G++ R+G S RGGC G +L CK
Sbjct: 27 NPGQSWSVDVPAGTKGARVWARTGCNFDGS--GRGGCQTGDCGGVLDCK 73
>gi|444321|prf||1906370A protein P21 [Glycine max]
Length = 202
Score = 32.7 bits (73), Expect = 1.8
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 91 SPGRSWDQDTSMQAEGSKARLRSGLTGTDSQPPRGGCSPGQLHPLLICK 237
+PG+SW D +G++ R+G S RGGC G +L CK
Sbjct: 27 NPGQSWSVDVPAGTKGARVWARTGCNFDGS--GRGGCQTGDCGGVLDCK 73
>gi|14601761|ref|NP_148302.1| hypothetical protein [Aeropyrum pernix]
gi|7516858|pir||E72500 hypothetical protein APE1979 - Aeropyrum pernix (strain K1)
gi|5105677|dbj|BAA80989.1| (AP000063) 141aa long hypothetical protein [Aeropyrum pernix]
Length = 141
Score = 32.3 bits (72), Expect = 2.4
Identities = 14/76 (18%), Positives = 40/76 (52%)
Frame = -1
Query: 507 IFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKV 328
I + ++ + DPE P+ + +L ++ +VRV+ + + V + T C ++ + ++
Sbjct: 25 IVEALKEVYDPEIPVNVYDLGLIYEVRVEGPREKPRIKVKMSLTAIGCPVSVALPAYVED 84
Query: 327 KLLRSLPQRFKMDVHI 280
+ ++P+ ++V +
Sbjct: 85 AIREAVPEAEDVEVEV 100
>gi|13486780|dbj|BAB40013.1| (AP003021) hypothetical protein [Oryza sativa]
Length = 169
Score = 32.3 bits (72), Expect = 2.4
Identities = 15/46 (32%), Positives = 23/46 (49%)
Frame = +1
Query: 79 NNGNSPGRSWDQDTSMQAEGSKARLRSGLTGTDSQPPRGGCSPGQL 216
+ G G+ D +M+ G+ AR R+G G+ RG C PG +
Sbjct: 36 SGGGGGGKEGDGARAMEGTGTDARARAGERGSGRGRRRGRCGPGDV 81
>gi|14548279|sp|Q9QX01|TRP1_RAT SHORT TRANSIENT RECEPTOR POTENTIAL CHANNEL 1 (TRPC1) (TRP-1
PROTEIN) (TRP1)
gi|3786396|gb|AAC67387.1| (AF061266) trp1 beta variant [Rattus norvegicus]
Length = 759
Score = 32.3 bits (72), Expect = 2.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 633 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWVCS 670
>gi|7303616|gb|AAF58668.1| (AE003826) CG13207 gene product [Drosophila melanogaster]
Length = 1638
Score = 32.3 bits (72), Expect = 2.4
Identities = 24/70 (34%), Positives = 31/70 (44%)
Frame = +1
Query: 136 GSKARLRSGLTGTDSQPPRGGCSPGQLHPLLICKLLVHCML*GMGPRSNVHVHLETLRKG 315
G AR+ LTG + P ++ P L KL H GM PR +HV L TL
Sbjct: 6 GKVARVHETLTGRNVIMCHVHIRPERIAPPL-SKLQQHTQFSGMRPRKGIHVLLTTLVVS 64
Query: 316 AQKLDLDGQT 345
++GQT
Sbjct: 65 LSLSKINGQT 74
>gi|6755885|ref|NP_035773.1| transient receptor protein 1 [Mus musculus]
gi|12643783|sp|Q61056|TRP1_MOUSE SHORT TRANSIENT RECEPTOR POTENTIAL CHANNEL 1 (TRPC1) (TRANSIENT
RECEPTOR PROTEIN 1) (MTRP1) (TRP-RELATED PROTEIN 1)
gi|1911245|gb|AAB50622.1| (U73625) Mtrp1 alpha [Mus musculus]
Length = 809
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 683 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 720
>gi|1351302|sp|P48995|TRP1_HUMAN SHORT TRANSIENT RECEPTOR POTENTIAL CHANNEL 1 (TRPC1) (TRP-1
PROTEIN)
gi|2136326|pir||S68238 trp-1 protein - human
gi|1072044|gb|AAA93251.1| (U31110) unspliced trp-1 protein [Homo sapiens]
Length = 793
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 667 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 704
>gi|14548281|sp|O18784|TRP1_BOVIN SHORT TRANSIENT RECEPTOR POTENTIAL CHANNEL 1 (TRPC1) (TRP-1
PROTEIN)
gi|2331275|gb|AAC48771.1| (AF012900) trp-1a [Bos taurus]
Length = 793
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 667 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 704
>gi|4507685|ref|NP_003295.1| transient receptor potential channel 1 [Homo sapiens]
gi|1072043|gb|AAA93252.1| (U31110) alternatively spliced trp-1 protein [Homo sapiens]
gi|1359890|emb|CAA98108.1| (Z73903) TRPC1A protein [Homo sapiens]
gi|1370119|emb|CAA61447.1| (X89066) TRPC1 protein [Homo sapiens]
Length = 759
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 633 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 670
>gi|14548294|sp|Q9TUN9|TRP1_RABIT SHORT TRANSIENT RECEPTOR POTENTIAL CHANNEL 1 (TRPC1) (CALCIUM
INFLUX CHANNEL TRPC1A)
gi|5759114|gb|AAD50982.1|AF170493_1 (AF170493) putative calcium influx channel TRPC1A [Oryctolagus
cuniculus]
Length = 759
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 633 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 670
>gi|2331277|gb|AAC48772.1| (AF012901) trp-1b [Bos taurus]
Length = 759
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 633 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 670
>gi|2136328|pir||I38361 TRPC1 protein - human
Length = 810
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 684 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 721
>gi|2052504|gb|AAC53162.1| (U95167) Mtrp1 beta [Mus musculus]
gi|6179958|gb|AAF05725.1|AF191551_1 (AF191551) putative Ca influx channel beta variant [Mus musculus]
Length = 775
Score = 32.0 bits (71), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 395 LWLSHQPFRTAAWPPLLVCPSRSSFCAPFLSVSRWTCT 282
LWLS+ + PP + PS + C S+S+W C+
Sbjct: 649 LWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICS 686
>gi|7300675|gb|AAF55823.1| (AE003732) CG5630 gene product [Drosophila melanogaster]
Length = 445
Score = 30.8 bits (68), Expect = 7.0
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Frame = -1
Query: 552 GEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVR--VQVSDPE-STVAVAFT 382
G+E+ PDS+D+R FDLI + N + ++ + R Q++D + T A ++
Sbjct: 220 GQENIPTPDSVDSRGEFDLIHNSNQADADFSIYNRSSTTTARPIFQINDSDFVTSAPSWR 279
Query: 381 PT----IPHCSMATLIGLSIKVKLLRSLPQRFKMD 289
P+ P + + ++GL R +PQ +D
Sbjct: 280 PSNSIRRPPPTRSPVVGLPTMRPNARPVPQTGGVD 314
>gi|13421981|gb|AAK22733.1| (AE005750) conserved hypothetical protein [Caulobacter crescentus]
Length = 603
Score = 30.4 bits (67), Expect = 9.1
Identities = 20/62 (32%), Positives = 31/62 (49%)
Frame = -1
Query: 540 EQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTVAVAFTPTIPHCS 361
E PD++ ARE+ L DP T+ + ++ E ++ + E T A TPT P +
Sbjct: 325 EAQPDAVLAREVLQLAAGERDPARFATVADQDLFEPGDMRTLEAEDTRARLETPT-PALA 383
Query: 360 MA 355
MA
Sbjct: 384 MA 385
>gi|6323885|ref|NP_013956.1| Protein required for processing of pre-rRNA; Rrp5p [Saccharomyces
cerevisiae]
gi|2498865|sp|Q05022|RRP5_YEAST RRNA BIOGENESIS PROTEIN RRP5
gi|1362396|pir||S57596 ribosomal RNA processing protein RRP5 - yeast (Saccharomyces
cerevisiae)
gi|887610|emb|CAA90200.1| (Z49939) Rrp5p [Saccharomyces cerevisiae]
Length = 1729
Score = 30.4 bits (67), Expect = 9.1
Identities = 19/70 (27%), Positives = 35/70 (49%)
Frame = -1
Query: 522 IDAREIFDLIRSINDPEHPLTLEELNVVEQVRVQVSDPESTVAVAFTPTIPHCSMATLIG 343
+D E+FD I D + PL+ + + V ++V++ + F P S A+++
Sbjct: 922 VDIAEVFDTYEEITDKKQPLSNYKKDDV--IKVKIIGNHDVKSHKFLPITHKISKASVLE 979
Query: 342 LSIKVKLLRS 313
LS+K L+S
Sbjct: 980 LSMKPSELKS 989
Database: nr
Posted date: Jul 30, 2001 8:58 PM
Number of letters in database: 230,545,999
Number of sequences in database: 727,771
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 264,356,692
Number of Sequences: 727771
Number of extensions: 6444462
Number of successful extensions: 19516
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 18492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19498
length of database: 230,545,999
effective HSP length: 112
effective length of database: 149,035,647
effective search space used: 11773816113
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)