Query= gnl|UG|Hs#S433985 zh69b03.s1 Homo sapiens cDNA, 3' end

/clone=IMAGE:417293 /clone_end=3' /gb=W89120 /gi=1404482 /ug=Hs.65135

/len=610

         (610 letters)

 

Database: nr

           576,719 sequences; 181,542,687 total letters

 

Searchingdone

 

                                                                   Score     E

Sequences producing significant alignments:                        (bits)  Value

 

dbj|BAB14664.1| (AK023742) unnamed protein product [Homo sapiens]     112  5e-036

 

>dbj|BAB14664.1| (AK023742) unnamed protein product [Homo sapiens]

            Length = 1081

           

 Score =  112 bits (277), Expect(3) = 5e-036

 Identities = 55/66 (83%), Positives = 59/66 (89%), Gaps = 1/66 (1%)

 Frame = -2

 

Query: 522  FHQLVQRXQQAYMQYIHHRLIHLNSADYDDFVNAIRSARSAFCLNAMGMMQFNDILQNL- 346

            FHQLVQR QQAYMQYIHH LIHL  ADYDDFVNAIRSARSAFCL  MGMMQFNDILQNL

Sbjct: 1001 FHQLVQRCQQAYMQYIHHSLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLK 1060

 

Query: 345  QAQQTDQ 325

            +++QT +

Sbjct: 1061 RSKQTKE 1067

 

 

 Score = 46.5 bits (108), Expect(3) = 5e-036

 Identities = 21/25 (84%), Positives = 21/25 (84%)

 Frame = -1

 

Query: 607  PVFLQEIVMEDLQRLSPVHAHNHLR 533

            P  LQEIVME LQRLSP HAHNHLR

Sbjct: 973  PFVLQEIVMETLQRLSPAHAHNHLR 997

 

 

 Score = 34.8 bits (78), Expect(3) = 5e-036

 Identities = 15/15 (100%), Positives = 15/15 (100%)

 Frame = -3

 

Query: 323  ELWQRVSLEMATFSP 279

            ELWQRVSLEMATFSP

Sbjct: 1067 ELWQRVSLEMATFSP 1081

 

 

  Database: nr

    Posted date:  Oct 24, 2000  1:47 AM

  Number of letters in database: 181,542,687

  Number of sequences in database:  576,719

 

Lambda     K      H

   0.318    0.135    0.000

 

Gapped

Lambda     K      H

   0.270   0.0470    0.000

 

 

Matrix: BLOSUM62

Gap Penalties: Existence: 11, Extension: 1

Number of Hits to DB: 209554593

Number of Sequences: 576719

Number of extensions: 4534785

Number of successful extensions: 17690

Number of sequences better than 1.0e-04: 2

Number of HSP's better than  0.0 without gapping: 1

Number of HSP's successfully gapped in prelim test: 0

Number of HSP's that attempted gapping in prelim test: 17687

Number of HSP's gapped (non-prelim): 3

length of query: 203

length of database: 181,542,687

effective HSP length: 52

effective length of query: 150

effective length of database: 151,553,299

effective search space: 22732994850

effective search space used: 22732994850

frameshift window, decay const: 50,  0.1

T: 12

A: 40

X1: 16 ( 7.3 bits)

X2: 38 (14.8 bits)

X3: 64 (24.9 bits)

S1: 41 (21.7 bits)

S2: 112 (48.0 bits)