Query=
gnl|UG|Hs#S511899 22g11 Homo sapiens cDNA /gb=W27076
/gi=1306655
/ug=Hs.122666 /len=722
(722 letters)
Database:
nr
576,719 sequences; 181,542,687 total letters
Searchingdone
Score
E
Sequences
producing significant alignments:
(bits)
Value
ref|NP_060863.1||
hypothetical protein FLJ11336 >gi|7023926|dbj|... 206 2e-052
gb|AAF46097.1|
(AE003435) CG16721 gene product [Drosophila melan... 69 4e-011
>ref|NP_060863.1||
hypothetical protein FLJ11336
>gi|7023926|dbj|BAA92131.1|
(AK002198) unnamed protein product [Homo sapiens]
Length = 509
Score = 206 bits (519), Expect =
2e-052
Identities = 107/122 (87%), Positives =
109/122 (88%)
Frame = +1
Query:
4
STXNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQGVQRPHSSPPRFVTVEELL
183
S
NEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQ
VQRPHSSPPRFVTVEELL
Sbjct:
8
SNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDSSSPQRVQRPHSSPPRFVTVEELL
67
Query:
184 ETARGVANMALAHEIVVNGDFQIXPVELPENSLKKRVKEIVHKAFWGLLELCS*VKIPPA
363
ETARGV NMALAHEIVVNGDFQI PVELPENSLKKRVKEIVHKAFW L + + PPA
Sbjct:
68
ETARGVTNMALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSV-QLSEDPPA
126
Query:
364 YD 369
YD
Sbjct:
127 YD 128
>gb|AAF46097.1|
(AE003435) CG16721 gene product [Drosophila melanogaster]
Length = 494
Score = 69.5 bits (167), Expect =
4e-011
Identities = 39/97 (40%), Positives =
64/97 (65%), Gaps = 6/97 (6%)
Frame = +1
Query:
79
DEALQKAIKSDS-SSPQGVQR-----PHSSPPRFVTVEELLETARGVANMALAHEIVVNG
240
+E ++ I++DS SS + + R +PP+
VT++E+ + + NM LAHEI +N
Sbjct:
18
EEHEERRIRTDSESSVESMTRFVLPSLDGTPPKIVTLDEVSSMFKNLRNMELAHEIALNP
77
Query:
241 DFQIXPVELPENSLKKRVKEIVHKAFWGLLELCS*VKIPPAYD 369
DF++ E P +SL+ +K++VHKAFW LL + +
PP+YD
Sbjct:
78
DFKLQKYEPPSDSLEGAIKKMVHKAFWDLLRV-QLDRQPPSYD 119
Database: nr
Posted date: Oct 24, 2000 1:47 AM
Number of letters in database:
181,542,687
Number of sequences in database: 576,719
Lambda K
H
0.318 0.135 0.000
Gapped
Lambda K
H
0.270 0.0470 0.000
Matrix:
BLOSUM62
Gap
Penalties: Existence: 11, Extension: 1
Number
of Hits to DB: 155177920
Number
of Sequences: 576719
Number
of extensions: 2704992
Number
of successful extensions: 6323
Number
of sequences better than 1.0e-04: 4
Number
of HSP's better than 0.0 without
gapping: 2
Number
of HSP's successfully gapped in prelim test: 0
Number
of HSP's that attempted gapping in prelim test: 6319
Number
of HSP's gapped (non-prelim): 3
length
of query: 240
length
of database: 181,542,687
effective
HSP length: 54
effective
length of query: 186
effective
length of database: 150,399,861
effective
search space: 27974374146
effective
search space used: 27974374146
frameshift
window, decay const: 50,
0.1
T:
12
A:
40
X1:
16 ( 7.3 bits)
X2:
38 (14.8 bits)
X3:
64 (24.9 bits)
S1:
41 (21.7 bits)
S2:
112 (48.0 bits)