Query=
gnl|UG|Hs#S1367581 Homo sapiens mRNA for KIAA0831 protein,
complete
cds /cds=(576,1715) /gb=AB020638 /gi=4240150 /ug=Hs.103000
/len=4943
(4943 letters)
Database:
nr
576,719 sequences; 181,542,687 total letters
Searchingdone
Score
E
Sequences
producing significant alignments:
(bits)
Value
ref|NP_055739.1||
KIAA0831 protein >gi|4240151|dbj|BAA74854.1| (... 675 0.0
sp|P39194|ALU7_HUMAN
ALU SUBFAMILY SQ SEQUENCE CONTAMINATION WAR... 116 1e-033
gb|AAF56856.1|
(AE003768) CG11877 gene product [Drosophila melan... 140 1e-031
sp|P39193|ALU6_HUMAN
ALU SUBFAMILY SP SEQUENCE CONTAMINATION WAR... 108 9e-031
sp|P39188|ALU1_HUMAN
ALU SUBFAMILY J SEQUENCE CONTAMINATION WARN... 109 2e-025
sp|P39192|ALU5_HUMAN
ALU SUBFAMILY SC SEQUENCE CONTAMINATION WAR... 99 2e-021
sp|P39189|ALU2_HUMAN
ALU SUBFAMILY SB SEQUENCE CONTAMINATION WAR... 106 2e-021
sp|P39190|ALU3_HUMAN
ALU SUBFAMILY SB1 SEQUENCE CONTAMINATION WA... 106 2e-021
ref|NP_060265.1||
hypothetical protein FLJ20378 >gi|7020440|dbj|... 83 2e-021
sp|P39195|ALU8_HUMAN
ALU SUBFAMILY SX SEQUENCE CONTAMINATION WAR... 92 3e-021
>ref|NP_055739.1||
KIAA0831 protein >gi|4240151|dbj|BAA74854.1| (AB020638)
KIAA0831
protein [Homo sapiens]
Length = 379
Score = 675 bits (1723), Expect =
0.0
Identities = 330/379 (87%), Positives =
330/379 (87%)
Frame = +1
Query:
577
MSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLG
756
MSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLG
Sbjct:
1
MSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLG
60
Query:
757
DLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPAXXXXXXXXXXXXXX
936
DLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPA
Sbjct:
61
DLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSST
120
Query:
937
XXKLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPD
1116
KLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPD
Sbjct:
121
VSKLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPD
180
Query:
1117 MEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNA
1296
MEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNA
Sbjct:
181
MEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNA
240
Query:
1297 NILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVA
1476
NILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVA
Sbjct:
241
NILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVA
300
Query:
1477 GESDESGDERVSDEETDLGTDWENLPSPRFCDIPXXXXXXXXXXXXXXXXXXXXXXXXXX
1656
GESDESGDERVSDEETDLGTDWENLPSPRFCDIP
Sbjct:
301
GESDESGDERVSDEETDLGTDWENLPSPRFCDIPSQSVEVSQSQSTQASPPIASSSAGGM
360
Query:
1657 XXXXXXXVTSWFKAYTGHR 1713
VTSWFKAYTGHR
Sbjct:
361 ISSAAASVTSWFKAYTGHR
379
>sp|P39194|ALU7_HUMAN
ALU SUBFAMILY SQ SEQUENCE CONTAMINATION WARNING ENTRY
Length = 593
Score = 116 bits (287), Expect(2) =
1e-033
Identities = 54/69 (78%), Positives =
57/69 (82%)
Frame = +2
Query:
2819 RARWLTPVIPALWEAEAGGSLEVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREA
2998
RARWLTPVIPALWEAEAGGS EVRS R AW TW NPVS ++ + R WWR PVIPATREA
Sbjct:
2
RARWLTPVIPALWEAEAGGSPEVRSSRPAWPTWXNPVSTKNTKISRAWWRAPVIPATREA
61
Query:
2999 AAGESLEPG 3025
AGESLEPG
Sbjct:
62 EAGESLEPG
70
Score = 90.5 bits (221), Expect(2) =
2e-022
Identities = 41/60 (68%), Positives =
44/60 (73%)
Frame = -2
Query:
2983 WDYRRAPPHPVIFCTSSRNRVSPC*PGCSQTPDLK*SACLGLPKCRDYRREPPRPAGKFF
2804
WDYRR PP P FC SR+ VSPC PG S+TPDL+ S LGLPKC DYRREPPRPA F
Sbjct:
340
WDYRRPPPRPANFCIFSRDGVSPCWPGWSRTPDLRXSTRLGLPKCWDYRREPPRPAXXXF
399
Score = 82.3 bits (200), Expect(2) =
2e-027
Identities = 40/62 (64%), Positives =
41/62 (65%)
Frame = +1
Query:
3583 FFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVET
3762
FFL AQAGV WR L
SLQPP PGF+RF LSLPSSWDYR P
PANFCI
Sbjct:
299
FFLRRSFALVAQAGVQWRDLGSLQPPPPGFKRFSCLSLPSSWDYRRPPPRPANFCIFSRD
358
Query:
3763 GV 3768
GV
Sbjct:
359 GV 360
Score = 81.5 bits (198), Expect(2) =
1e-018
Identities = 50/97 (51%), Positives =
57/97 (58%), Gaps = 3/97 (3%)
Frame = +1
Query:
2731 CSEMQRRSLRLMLLCSVLGKAQYKERISQ---PGAVAHACNPXXXXXXXXXXXXXQEFES
2901
CSE + R C+ + K R+ + PGAVAHACNP
QEFE+
Sbjct:
174
CSEPRSRH------CTPAWATRAKLRLKKXXXPGAVAHACNPSTLGGRGGWITXGQEFET
227
Query:
2902 SLANMVKPCFC*KCRKLPGVVAHACNPSYSGGCGGRIA*T 3021
SLANMVKP K
+ PGVVA ACNPSYSGG G RIA
T
Sbjct:
228
SLANMVKPRLYXKYKNXPGVVAGACNPSYSGGXGRRIAXT 267
Score = 76.5 bits (185), Expect(2) =
6e-021
Identities = 45/68 (66%), Positives =
49/68 (71%)
Frame = -1
Query:
3020 VQAIXXXXXXXXXXXQACATTPGNFLHF*QKQGFTMLARLLSNS*PQVIRLPRPPKVPGL
2841
VQAI
QA ATTPG FL+F ++GFTMLARL+SNS
PQVI PRPPKV
GL
Sbjct:
526
VQAILLPQPPEXLGLQAPATTPGXFLYFXXRRGFTMLARLVSNSXPQVIHPPRPPKVLGL
585
Query:
2840 QA*ATAPG 2817
QA ATAPG
Sbjct:
586 QAXATAPG
593
Score = 76.1 bits (184), Expect(2) =
1e-021
Identities = 39/71 (54%), Positives =
50/71 (69%)
Frame = +3
Query:
2745 AQILTADATLLCSGESTI*RKNFPAGRGGSRL*SRHFGRPRQADHLRSGV*EQPG*HGET
2924
A+I ++L E+ +K AGRGGSRL S+HFGRPR+ DHLRSGV +QPG
HGET
Sbjct:
77
AEIAPLHSSLGNKSETPSQKKXXXAGRGGSRLXSQHFGRPRRVDHLRSGVRDQPGQHGET
136
Query:
2925 LFLLEVQKITG 2957
LL++QK+
G
Sbjct:
137 PSLLKIQKLAG
147
Score = 72.6 bits (175), Expect(2) =
6e-019
Identities = 37/53 (69%), Positives =
38/53 (70%)
Frame = +2
Query:
3611 LPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGF
3769
LPRLEC GAISA CN L GS DS SASRVAGI G HHA+LIFVF GF
Sbjct:
408
LPRLECSGAISAHCNLRLPGSSDSPASASRVAGITGARHHARLIFVFLVETGF
460
Score = 71.8 bits (173), Expect(2) =
2e-021
Identities = 40/69 (57%), Positives =
41/69 (58%), Gaps = 3/69 (4%)
Frame = -3
Query:
2991 RVAGITGVRHHTR*FSALLAETGFHHVSQAALKLLTXXXXXXXXXXXAGITGVSHRARLG
2812
RVAGITG RHH R
L ETGFHHV QA L+LLT
AGITGVSHRAR
Sbjct:
437
RVAGITGARHHARLIFVFLVETGFHHVGQAGLELLTSGDPPASASQSAGITGVSHRARXX
496
Query:
2811 NSF---FILCFP 2785
F F C P
Sbjct:
497 XFFETEFRSCCP
508
Score = 67.5 bits (162), Expect(2) =
9e-023
Identities = 37/62 (59%), Positives =
43/62 (68%)
Frame = -3
Query:
3768 NPRLYQNTKISWA*WQVPIIPATREAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQ
3589
NP +NTKIS A W+
P+IPATREAE ES EP R LQ AE+AP HSSLG+ + Q
Sbjct:
36
NPVSTKNTKISRAWWRAPVIPATREAEAGESLEPGRRRLQXAEIAPLHSSLGNKSETPSQ
95
Query:
3588 KK 3583
KK
Sbjct:
96 KK
97
Score = 65.2 bits (156), Expect(2) =
2e-027
Identities = 33/61 (54%), Positives =
37/61 (60%)
Frame = +2
Query:
3743 FVFW*RRGFSPCWPGWS*TPGFG*SACLGLLGCWDCRPEPPRPAPYGFFYTAGISVLSAQ
3922
F + R G SPCWPGWS TP S LGL CWD R EPPRPA FF G+S+L +
Sbjct:
352
FCIFSRDGVSPCWPGWSRTPDLRXSTRLGLPKCWDYRREPPRPAXXXFF-XDGVSLLLPR
410
Query:
3923 L 3925
L
Sbjct:
411 L 411
Score = 64.4 bits (154), Expect(2) =
9e-023
Identities = 30/44 (68%), Positives =
31/44 (70%)
Frame = -2
Query:
3874 GRARWLRPAIPAP*EAKASGSPEARSSRPAWPTW*KPPSLPKYK 3743
GRARWL P IPA EA+A GSPE
RSSRPAWPTW P S K
Sbjct:
1
GRARWLTPVIPALWEAEAGGSPEVRSSRPAWPTWXNPVSTKNTK 44
Score = 64.0 bits (153), Expect =
1e-008
Identities = 36/62 (58%), Positives =
37/62 (59%)
Frame = +3
Query:
3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG
3764
FF
CPGWS VA S L AT+ S VQAIL
QPPE LGL APA P FLYF
Sbjct:
498
FFETEFRSCCPGWSAVARSRLTATSASRVQAILLPQPPEXLGLQAPATTPGXFLYFXXRR
557
Query:
3765 GF 3770
GF
Sbjct:
558 GF 559
Score = 62.5 bits (149), Expect =
4e-008
Identities = 45/96 (46%), Positives =
51/96 (52%), Gaps = 1/96 (1%)
Frame = -1
Query:
3872 PGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVKTPVSTKIQKLAG-HDGRCL*SQXXX
3696
PGAVA ACNPSTLGG+G IT QEF+TSLANMVK +
K + G G C S
Sbjct:
200
PGAVAHACNPSTLGGRGGWITXGQEFETSLANMVKPRLYXKYKNXPGVVAGACNPSYSGG
259
Query:
3695 XXXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVSKK 3585
+ S R P
ER+SVSKK
Sbjct:
260
XGRRIAXTREAEVAVSRDRATALQPG-QQERNSVSKK 295
Score = 62.1 bits (148), Expect =
5e-008
Identities = 32/59 (54%), Positives =
40/59 (67%)
Frame = -3
Query:
3912 KTEIPAV*KNP*GAGRGGSGLQSQHPRRPRQADHPKPGVQDQPGQHGENPRLYQNTKIS
3736
K+E P+ K AGRGGS L SQH RPR+ DH + GV+DQPGQHGE P L + K++
Sbjct:
89
KSETPSQ-KKXXXAGRGGSRLXSQHFGRPRRVDHLRSGVRDQPGQHGETPSLLKIQKLA
146
Score = 55.4 bits (131), Expect(2) =
2e-021
Identities = 25/35 (71%), Positives =
26/35 (73%)
Frame = -1
Query:
3125 PAEGNSFFF*DGASLLLPRLECNGTISAHCNLRLP 3021
P FF
DG SLLLPRLEC+G ISAHCNLRLP
Sbjct:
392
PRPAXXXFFXDGVSLLLPRLECSGAISAHCNLRLP 426
Score = 52.7 bits (124), Expect =
4e-005
Identities = 33/67 (49%), Positives =
35/67 (51%)
Frame = -1
Query:
3770 KTPVSTKIQKLAGHDGRCL*SQXXXXXXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVS
3591
+TP KIQKLAG G
L SQ
NPG GGCSE R RH TPAWA R +
Sbjct:
135
ETPSLLKIQKLAGRGGGRLXSQLLGRLRQENRLNPGGGGCSEPRSRHCTPAWAT-RAKLR
193
Query:
3590 KKKKDHP 3570
KK P
Sbjct:
194 LKKXXXP
200
Score = 52.3 bits (123), Expect(2) =
1e-033
Identities = 26/35 (74%), Positives =
26/35 (74%)
Frame = +1
Query:
3022 GRRRLQ*AEIVPLHSSLGNKSEAPSQKKKEFPSAG 3126
GRRRLQ AEI PLHSSLGNKSE PSQKK
G
Sbjct:
70
GRRRLQXAEIAPLHSSLGNKSETPSQKKXXXAGRG 104
Score = 51.9 bits (122), Expect =
6e-005
Identities = 41/106 (38%), Positives =
49/106 (45%), Gaps = 3/106 (2%)
Frame = +1
Query:
3556 GFSRCGWSFFFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPS--
3729
G S F ETE
RS
W + + + R + LP + L +
Sbjct:
488
GVSHRARXXXFFETEFRSCCPG---WSAVARSRLTATSASRVQAILLPQPPEXLGLQAPA
544
Query:
3730 -CPANFCILVETGVFTMLARLVLNSWLRVIRLPWPPRVLGLQA*ATAPG
3873
P F
FTMLARLV NS +VI P PP+VLGLQA ATAPG
Sbjct:
545
TTPGXFLYFXXRRGFTMLARLVSNSXPQVIHPPRPPKVLGLQAXATAPG
593
Score = 51.9 bits (122), Expect(2) =
1e-021
Identities = 21/24 (87%), Positives =
21/24 (87%)
Frame = +2
Query:
3014 LEPGGGGCSEPRLCHCTPAWATRA 3085
L PGGGGCSEPR
HCTPAWATRA
Sbjct:
167 LNPGGGGCSEPRSRHCTPAWATRA
190
Score = 49.2 bits (115), Expect(2) =
6e-021
Identities = 21/24 (87%), Positives =
23/24 (95%)
Frame = -2
Query:
3103 FFETEPRSCCPGWSAMAQSRLTAT 3032
FFETE RSCCPGWSA+A+SRLTAT
Sbjct:
498 FFETEFRSCCPGWSAVARSRLTAT
521
Score = 46.5 bits (108), Expect(2) =
6e-019
Identities = 21/36 (58%), Positives =
21/36 (58%)
Frame = +3
Query:
3765 GFHHVGQAGLELLASGDPXXXXXXXXXXXXXXHRAR 3872
GFHHVGQAGLELL SGDP
HRAR
Sbjct:
459
GFHHVGQAGLELLTSGDPPASASQSAGITGVSHRAR 494
Score = 40.2 bits (92), Expect(2) =
2e-022
Identities = 18/21 (85%), Positives =
19/21 (89%)
Frame = -3
Query:
3105 FFLRRSLALVAQAGVQWHNLG 3043
FFLRRS ALVAQAGVQW +LG
Sbjct:
299 FFLRRSFALVAQAGVQWRDLG
319
Score = 36.4 bits (82), Expect(2) =
1e-018
Identities = 18/20 (90%), Positives =
18/20 (90%)
Frame = +3
Query:
3027 AEVAVSRDCAIALQPGQQER 3086
AEVAVSRD A ALQPGQQER
Sbjct:
270 AEVAVSRDRATALQPGQQER
289
>gb|AAF56856.1|
(AE003768) CG11877 gene product [Drosophila melanogaster]
Length = 503
Score = 140 bits (349), Expect =
1e-031
Identities = 95/328 (28%), Positives =
159/328 (47%), Gaps = 7/328 (2%)
Frame = +1
Query:
574
IMSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKL
753
I + + ++E L+Q I
+ + E + + N + ++ +K + ++
+
Sbjct:
141
IKAKRKQLELLQQLISGTGQRLRVLGERRDELRRANAEKRKNLPKYPDKVKMLENYVLDR
200
Query:
754
GDLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPAXXXXXXXXXXXXX
933
+ +EK
+ + R I +L + +FPI EV +++
Sbjct:
201
VEKIEKLRETHLGLLDSIKQAARRSIQQLVTYVFPIAEVV--LKEEQQRRASVERTEEAE
258
Query:
934
XXXKLAEARRTTYLSGRWVCDDHN-GDTSISITGPWISLPNNGDYSAYYSWVEEKK----
1098
LA+A+ T+Y+ G+WV + I GP SLP NGDY+AY W+ + K
Sbjct:
259
TIAALADAKNTSYIRGKWVFHGSGISEVQYRIVGP--SLPANGDYTAYLDWLADNKDDVP
316
Query:
1099 -TTQGPDMEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTR
1275
T AY
I AL Y QL
+LS L+V LP K+ +FC + L++++F
R
Sbjct:
317
KATANEITPSRFEAYRIVGALTYTAQLTQLLSFYLNVRLPHKIAYGDFCRKLLNEEQFRR
376
Query:
1276 AVKKLNANILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEV-RADLEESM
1452
+ +LN+NI+YL ++Q V L L HTL NL+ ++ LGR G +V
A L +S+
Sbjct:
377
KISRLNSNIMYLAYTQQVKLRALIEQHTLENLLAILDLERSDLGRYGHLDVNNAPLMKSV
436
Query:
1453 EFVDPGVAGESDESGDERVSDEETDLGTDWENLPS 1557
+ + G+ E+ E
S++E L DWE +PS
Sbjct:
437
DSLLIGI-----ETATESESEDENSLRMDWEAVPS 466
>sp|P39193|ALU6_HUMAN
ALU SUBFAMILY SP SEQUENCE CONTAMINATION WARNING ENTRY
Length = 593
Score = 108 bits (266), Expect(2) =
9e-031
Identities = 52/69 (75%), Positives =
55/69 (79%)
Frame = +2
Query:
2819 RARWLTPVIPALWEAEAGGSLEVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREA
2998
RARWLTPVIPALWEAEAGGS EV S R A
TW NPVS ++ + R WWR
PVIPATREA
Sbjct:
2
RARWLTPVIPALWEAEAGGSPEVGSSRPAXPTWRNPVSTKNTKISRAWWRMPVIPATREA
61
Query:
2999 AAGESLEPG 3025
AGESLEPG
Sbjct:
62 EAGESLEPG
70
Score = 88.9 bits (217), Expect(2) =
6e-022
Identities = 41/60 (68%), Positives =
44/60 (73%)
Frame = -2
Query:
2983 WDYRRAPPHPVIFCTSSRNRVSPC*PGCSQTPDLK*SACLGLPKCRDYRREPPRPAGKFF
2804
WDYR APP P FC SR+ VSPC G S+TPDL+ SA LGLPKC DYRREPPRPA F
Sbjct:
340
WDYRHAPPRPANFCIFSRDGVSPCWSGWSRTPDLRXSARLGLPKCWDYRREPPRPAXXXF
399
Score = 83.5 bits (203), Expect(2) =
3e-027
Identities = 40/62 (64%), Positives =
41/62 (65%)
Frame = +1
Query:
3583 FFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVET
3762
FFL
AQAGV WR L S QPP PGF+RF
LSLPSSWDYRH P PANFCI
Sbjct:
299
FFLRRSFALVAQAGVQWRDLGSPQPPPPGFKRFSCLSLPSSWDYRHAPPRPANFCIFSRD
358
Query:
3763 GV 3768
GV
Sbjct:
359 GV 360
Score = 80.0 bits (194), Expect(2) =
1e-018
Identities = 41/73 (56%), Positives =
46/73 (62%)
Frame = +1
Query:
2803 ERISQPGAVAHACNPXXXXXXXXXXXXXQEFESSLANMVKPCFC*KCRKLPGVVAHACNP
2982
++ PGAVAHACNP
+EFE+SL NM KP K
+ PGVVAHACNP
Sbjct:
195
KKXXXPGAVAHACNPSTLGGRGGRITXGREFETSLTNMEKPRLYXKYKNXPGVVAHACNP
254
Query:
2983 SYSGGCGGRIA*T 3021
SYSGG G RIA T
Sbjct:
255 SYSGGXGRRIAXT
267
Score = 80.0 bits (194), Expect(2) =
2e-022
Identities = 45/68 (66%), Positives =
50/68 (73%)
Frame = -1
Query:
3020 VQAIXXXXXXXXXXXQACATTPGNFLHF*QKQGFTMLARLLSNS*PQVIRLPRPPKVPGL
2841
VQAI
QACATTPG FL+F ++GF+ML RL+SNS
PQVIR PRPPKV GL
Sbjct:
526
VQAILLPQPPEXLGLQACATTPGXFLYFXXRRGFSMLVRLVSNSRPQVIRPPRPPKVLGL
585
Query:
2840 QA*ATAPG 2817
QA ATAPG
Sbjct:
586 QAXATAPG
593
Score = 74.9 bits (181), Expect(2) =
8e-021
Identities = 39/71 (54%), Positives =
50/71 (69%)
Frame = +3
Query:
2745 AQILTADATLLCSGESTI*RKNFPAGRGGSRL*SRHFGRPRQADHLRSGV*EQPG*HGET
2924
A+I ++L E+ +K AGRGGSRL S+HFGRPR+ADHLRSGV
+QP HGET
Sbjct:
77
AEIAPLHSSLGNKSETPSQKKXXXAGRGGSRLXSQHFGRPRRADHLRSGVRDQPDQHGET
136
Query:
2925 LFLLEVQKITG 2957
LL++QK+
G
Sbjct:
137 PSLLKIQKLAG
147
Score = 67.5 bits (162), Expect(2) =
2e-015
Identities = 36/53 (67%), Positives =
37/53 (68%)
Frame = +2
Query:
3611 LPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGF
3769
LPRLEC GAISA N L GS DS SASRVAGI G HHA+LIFVF GF
Sbjct:
408
LPRLECNGAISAHRNLRLPGSSDSPASASRVAGITGMRHHARLIFVFLVETGF
460
Score = 66.3 bits (159), Expect(2) =
4e-020
Identities = 36/62 (58%), Positives =
44/62 (70%)
Frame = -3
Query:
3768 NPRLYQNTKISWA*WQVPIIPATREAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQ
3589
NP +NTKIS A
W++P+IPATREAE ES EP R L+ AE+AP HSSLG+ + Q
Sbjct:
36
NPVSTKNTKISRAWWRMPVIPATREAEAGESLEPGRRRLRXAEIAPLHSSLGNKSETPSQ
95
Query:
3588 KK 3583
KK
Sbjct:
96 KK
97
Score = 65.2 bits (156), Expect(2) =
1e-018
Identities = 38/69 (55%), Positives =
40/69 (57%), Gaps = 3/69 (4%)
Frame = -3
Query:
2991 RVAGITGVRHHTR*FSALLAETGFHHVSQAALKLLTXXXXXXXXXXXAGITGVSHRARLG
2812
RVAGITG+RHH R
L ETGF HV QA L+L T
AGITGVSHRAR
Sbjct:
437
RVAGITGMRHHARLIFVFLVETGFLHVGQAGLELPTSGDPPASASQSAGITGVSHRARXX
496
Query:
2811 NSF---FILCFP 2785
F F C P
Sbjct:
497 XFFETEFRSCCP
508
Score = 63.6 bits (152), Expect(2) =
3e-027
Identities = 33/61 (54%), Positives =
37/61 (60%)
Frame = +2
Query:
3743 FVFW*RRGFSPCWPGWS*TPGFG*SACLGLLGCWDCRPEPPRPAPYGFFYTAGISVLSAQ
3922
F + R G SPCW GWS TP SA LGL CWD R EPPRPA FF G+S+L +
Sbjct:
352
FCIFSRDGVSPCWSGWSRTPDLRXSARLGLPKCWDYRREPPRPAXXXFF-XDGVSLLLPR
410
Query:
3923 L 3925
L
Sbjct:
411 L 411
Score = 60.9 bits (145), Expect =
1e-007
Identities = 32/59 (54%), Positives =
40/59 (67%)
Frame = -3
Query:
3912 KTEIPAV*KNP*GAGRGGSGLQSQHPRRPRQADHPKPGVQDQPGQHGENPRLYQNTKIS
3736
K+E P+ K AGRGGS L SQH RPR+ADH + GV+DQP QHGE P L + K++
Sbjct:
89
KSETPSQ-KKXXXAGRGGSRLXSQHFGRPRRADHLRSGVRDQPDQHGETPSLLKIQKLA
146
Score = 60.5 bits (144), Expect =
2e-007
Identities = 32/72 (44%), Positives =
40/72 (55%)
Frame = -1
Query:
3947 GSPAINHEAEHLKQRSQQCRRTHKGPGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVK
3768
G P H R++ + PGAVA ACNPSTLGG+G RIT +EF+TSL NM K
Sbjct:
175
GEPRSRHCTPAWATRAKLRLKKXXXPGAVAHACNPSTLGGRGGRITXGREFETSLTNMEK
234
Query:
3767 TPVSTKIQKLAG 3732
+ K + G
Sbjct:
235 PRLYXKYKNXPG
246
Score = 58.9 bits (140), Expect =
5e-007
Identities = 34/62 (54%), Positives =
36/62 (57%)
Frame = +3
Query:
3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG
3764
FF
CPGWS +A S L AT+ S VQAIL
QPPE LGL A A P FLYF
Sbjct:
498
FFETEFRSCCPGWSAMARSRLTATSASRVQAILLPQPPEXLGLQACATTPGXFLYFXXRR
557
Query:
3765 GF 3770
GF
Sbjct:
558 GF 559
Score = 56.6 bits (134), Expect(2) =
4e-020
Identities = 28/44 (63%), Positives =
29/44 (65%)
Frame = -2
Query:
3874 GRARWLRPAIPAP*EAKASGSPEARSSRPAWPTW*KPPSLPKYK 3743
GRARWL P IPA EA+A GSPE SSRPA PTW P S K
Sbjct:
1 GRARWLTPVIPALWEAEAGGSPEVGSSRPAXPTWRNPVSTKNTK
44
Score = 56.2 bits (133), Expect =
3e-006
Identities = 33/67 (49%), Positives =
35/67 (51%)
Frame = -1
Query:
3770 KTPVSTKIQKLAGHDGRCL*SQXXXXXXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVS
3591
+TP KIQKLAG G CL SQ
NPG GGC E R RH TPAWA R +
Sbjct:
135
ETPSLLKIQKLAGRGGACLXSQLLGRLRQENRLNPGGGGCGEPRSRHCTPAWAT-RAKLR
193
Query:
3590 KKKKDHP 3570
KK
P
Sbjct:
194 LKKXXXP
200
Score = 54.7 bits (129), Expect =
9e-006
Identities = 41/106 (38%), Positives =
50/106 (46%), Gaps = 3/106 (2%)
Frame = +1
Query:
3556 GFSRCGWSFFFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSC-
3732
G S
F ETE RS W + + + R + LP + L +C
Sbjct:
488
GVSHRARXXXFFETEFRSCCPG---WSAMARSRLTATSASRVQAILLPQPPEXLGLQACA
544
Query:
3733 --PANFCILVETGVFTMLARLVLNSWLRVIRLPWPPRVLGLQA*ATAPG
3873
P F F+ML
RLV NS +VIR P PP+VLGLQA
ATAPG
Sbjct:
545
TTPGXFLYFXXRRGFSMLVRLVSNSRPQVIRPPRPPKVLGLQAXATAPG
593
Score = 53.9 bits (127), Expect =
2e-005
Identities = 31/53 (58%), Positives =
34/53 (63%)
Frame = -2
Query:
3769 KPPSLPKYKN*LGMMAGAYNPSYSGG*DGRIA*TQEMVVAASGDGATTLQPGQ
3611
KP KYKN G++A A NPSYSGG RIA T+E VA S D A LQPGQ
Sbjct:
234
KPRLYXKYKNXPGVVAHACNPSYSGGXGRRIAXTREAEVAVSRDRAIALQPGQ
286
Score = 52.7 bits (124), Expect(2) =
1e-018
Identities = 25/35 (71%), Positives =
25/35 (71%)
Frame = -1
Query:
3125 PAEGNSFFF*DGASLLLPRLECNGTISAHCNLRLP 3021
P FF
DG SLLLPRLECNG ISAH NLRLP
Sbjct:
392
PRPAXXXFFXDGVSLLLPRLECNGAISAHRNLRLP 426
Score = 50.8 bits (119), Expect(2) =
9e-031
Identities = 25/35 (71%), Positives =
26/35 (73%)
Frame = +1
Query:
3022 GRRRLQ*AEIVPLHSSLGNKSEAPSQKKKEFPSAG 3126
GRRRL+ AEI PLHSSLGNKSE PSQKK
G
Sbjct:
70
GRRRLRXAEIAPLHSSLGNKSETPSQKKXXXAGRG 104
Score = 50.8 bits (119), Expect(2) =
2e-022
Identities = 22/24 (91%), Positives =
23/24 (95%)
Frame = -2
Query:
3103 FFETEPRSCCPGWSAMAQSRLTAT 3032
FFETE RSCCPGWSAMA+SRLTAT
Sbjct:
498 FFETEFRSCCPGWSAMARSRLTAT
521
Score = 50.4 bits (118), Expect(2) =
8e-021
Identities = 20/24 (83%), Positives =
20/24 (83%)
Frame = +2
Query:
3014 LEPGGGGCSEPRLCHCTPAWATRA 3085
L PGGGGC EPR
HCTPAWATRA
Sbjct:
167 LNPGGGGCGEPRSRHCTPAWATRA
190
Score = 40.2 bits (92), Expect(2) =
6e-022
Identities = 18/21 (85%), Positives =
19/21 (89%)
Frame = -3
Query:
3105 FFLRRSLALVAQAGVQWHNLG 3043
FFLRRS ALVAQAGVQW +LG
Sbjct:
299 FFLRRSFALVAQAGVQWRDLG
319
Score = 39.5 bits (90), Expect(2) =
2e-015
Identities = 19/36 (52%), Positives =
19/36 (52%)
Frame = +3
Query:
3765 GFHHVGQAGLELLASGDPXXXXXXXXXXXXXXHRAR 3872
GF HVGQAGLEL SGDP
HRAR
Sbjct:
459
GFLHVGQAGLELPTSGDPPASASQSAGITGVSHRAR 494
Score = 38.3 bits (87), Expect(2) =
1e-018
Identities = 19/20 (95%), Positives =
19/20 (95%)
Frame = +3
Query:
3027 AEVAVSRDCAIALQPGQQER 3086
AEVAVSRD AIALQPGQQER
Sbjct:
270 AEVAVSRDRAIALQPGQQER
289
>sp|P39188|ALU1_HUMAN
ALU SUBFAMILY J SEQUENCE CONTAMINATION WARNING ENTRY
Length = 591
Score = 109 bits (269), Expect(2) =
2e-025
Identities = 51/69 (73%), Positives =
55/69 (78%)
Frame = +2
Query:
2819 RARWLTPVIPALWEAEAGGSLEVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREA
2998
RARWLTPVIPALWEAEAGGSLE RS R AW T
NPVS ++ + R WWR
PV+PATREA
Sbjct:
2
RARWLTPVIPALWEAEAGGSLEPRSSRPAWATXXNPVSTKNTKISRAWWRAPVVPATREA
61
Query:
2999 AAGESLEPG 3025
AG SLEPG
Sbjct:
62 EAGGSLEPG
70
Score = 84.3 bits (205), Expect(2) =
2e-015
Identities = 39/56 (69%), Positives =
42/56 (74%)
Frame = -2
Query:
2983 WDYRRAPPHPVIFCTSSRNRVSPC*PGCSQTPDLK*SACLGLPKCRDYRREPPRPA
2816
WDYRRAPP P FC R+ VS C PG S+TP LK S+ LGLPKC
DYRREPPRPA
Sbjct:
536
WDYRRAPPRPANFCIFCRDGVSLCCPGWSRTPGLKXSSRLGLPKCWDYRREPPRPA
591
Score = 79.6 bits (193), Expect =
3e-013
Identities = 49/101 (48%), Positives =
60/101 (58%), Gaps = 2/101 (1%)
Frame = +1
Query:
2803 ERISQPGAVAHACNPXXXXXXXXXXXXXQEFESSLANMVKPCFC*KCRKLPGVVAHACNP
2982
++ PGAVAHACNP
QEFE+SL N+VKP K
+ PGVVA AC+P
Sbjct:
194
KKXXXPGAVAHACNPSTLGGRGGRITXAQEFETSLGNIVKPRLYKKYKNXPGVVARACSP
253
Query:
2983 SYSGGCGGRIA*TGRRRLQ*AEIVPLHSSL--GNKSEAPSQKK 3105
SYSGG G RIA R ++ A ++L G +SE SQKK
Sbjct:
254
SYSGGXGRRIA--XAREVEAAVSRDRATALQPGRQSETLSQKK 294
Score = 78.4 bits (190), Expect(2) =
7e-023
Identities = 39/61 (63%), Positives =
40/61 (64%)
Frame = +1
Query:
3586 FLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVETG
3765
F ET SRS AQAGV WR
SLQP PG +R LSLPSSWDYR P
PANFCI
G
Sbjct:
496
FFETGSRSVAQAGVQWRDHGSLQPRPPGLKRSSCLSLPSSWDYRRAPPRPANFCIFCRDG
555
Query:
3766 V 3768
V
Sbjct:
556 V 556
Score = 69.9 bits (168), Expect(2) =
7e-014
Identities = 37/52 (71%), Positives =
41/52 (78%)
Frame = -1
Query:
2972 ACATTPGNFLHF*QKQGFTMLARLLSNS*PQVIRLPRPPKVPGLQA*ATAPG
2817
A ATTPG FL+F ++GFTML
RL+SNS QVI PRPPKV GLQA ATAPG
Sbjct:
441
ARATTPGXFLYFLXRRGFTMLPRLVSNSWAQVILPPRPPKVLGLQAXATAPG
492
Score = 68.7 bits (165), Expect =
5e-010
Identities = 35/59 (59%), Positives =
40/59 (67%)
Frame = +2
Query:
3593 RRSLAQLPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGF
3769
R+ LA PRLEC GAI+A C+ L GS D SASRVAG G
HHA+LIFVF+
GF
Sbjct:
301
RQGLALSPRLECSGAITAHCSLDLPGSSDPPASASRVAGTTGARHHARLIFVFFVETGF
359
Score = 66.0 bits (158), Expect =
4e-009
Identities = 41/101 (40%), Positives =
46/101 (44%)
Frame = -3
Query:
3105 FFLRRSLALVAQAGVQWHNLGXXXXXXXXXXXXXXXXSRVAGITGVRHHTR*FSALLAET
2926
FFLR+ LAL +
SRVAG TG RHH R
ET
Sbjct:
298
FFLRQGLALSPRLECSGAITAHCSLDLPGSSDPPASASRVAGTTGARHHARLIFVFFVET
357
Query:
2925 GFHHVSQAALKLLTXXXXXXXXXXXAGITGVSHRARLGNSF 2803
GFH+V+QA L+LL
AGITGVSHRAR
F
Sbjct:
358
GFHYVAQAGLELLGSSDPPASASQSAGITGVSHRARXXXFF 398
Score = 65.2 bits (156), Expect(2) =
7e-016
Identities = 31/52 (59%), Positives =
38/52 (72%)
Frame = +3
Query:
2802 RKNFPAGRGGSRL*SRHFGRPRQADHLRSGV*EQPG*HGETLFLLEVQKITG
2957
+K AGRGGSRL S+HFGRPR+
DHL GV +QPG H ET L ++QK+ G
Sbjct:
95
KKXXXAGRGGSRLXSQHFGRPRREDHLSPGVRDQPGQHSETPSLQKIQKLAG
146
Score = 62.1 bits (148), Expect(2) =
2e-017
Identities = 35/61 (57%), Positives =
41/61 (66%)
Frame = -3
Query:
3768 NPRLYQNTKISWA*WQVPIIPATREAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQ
3589
NP +NTKIS A W+
P++PATREAE S EP R LQ A +AP HSSLG AR
L+
Sbjct:
36
NPVSTKNTKISRAWWRAPVVPATREAEAGGSLEPGRSRLQXAVIAPLHSSLGDRARPCLK
95
Query:
3588 K 3586
K
Sbjct:
96 K 96
Score = 60.9 bits (145), Expect =
1e-007
Identities = 29/47 (61%), Positives =
35/47 (73%)
Frame = -1
Query:
3872 PGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVKTPVSTKIQKLAG 3732
PGAVA ACNPSTLGG+G RIT +QEF+TSL N+VK
+ K + G
Sbjct:
199
PGAVAHACNPSTLGGRGGRITXAQEFETSLGNIVKPRLYKKYKNXPG 245
Score = 60.9 bits (145), Expect =
1e-007
Identities = 28/46 (60%), Positives =
33/46 (70%)
Frame = -3
Query:
3873 AGRGGSGLQSQHPRRPRQADHPKPGVQDQPGQHGENPRLYQNTKIS 3736
AGRGGS L SQH RPR+ DH PGV+DQPGQH E P L + K++
Sbjct:
100
AGRGGSRLXSQHFGRPRREDHLSPGVRDQPGQHSETPSLQKIQKLA 145
Score = 60.5 bits (144), Expect =
2e-007
Identities = 36/62 (58%), Positives =
37/62 (59%)
Frame = +3
Query:
3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG
3764
FF D VSL PGWS VA S L A +
S QAIL QPPE LGL A A P
FLYF
Sbjct:
397
FFXDRVSLCRPGWSAVARSRLTAASTSRAQAILLPQPPEXLGLQARATTPGXFLYFLXRR
456
Query:
3765 GF 3770
GF
Sbjct:
457 GF 458
Score = 59.7 bits (142), Expect =
3e-007
Identities = 33/62 (53%), Positives =
35/62 (56%)
Frame = -1
Query:
3770 KTPVSTKIQKLAGHDGRCL*SQXXXXXXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVS
3591
+TP KIQKLAG G
L SQ
+PG GCSE RH TPAWA ERD
VS
Sbjct:
134
ETPSLQKIQKLAGRGGARLXSQLLGRLRQEDRLSPGGRGCSEPXSRHCTPAWATERDPVS
193
Query:
3590 KK 3585
KK
Sbjct:
194 KK 195
Score = 55.4 bits (131), Expect =
5e-006
Identities = 32/59 (54%), Positives =
38/59 (64%)
Frame = -2
Query:
3769 KPPSLPKYKN*LGMMAGAYNPSYSGG*DGRIA*TQEMVVAASGDGATTLQPGQLSETPS
3593
KP KYKN G++A A +PSYSGG RIA +E+ A S D AT LQPG+ SET
S
Sbjct:
233
KPRLYKKYKNXPGVVARACSPSYSGGXGRRIAXAREVEAAVSRDRATALQPGRQSETLS
291
Score = 53.9 bits (127), Expect =
2e-005
Identities = 28/47 (59%), Positives =
31/47 (65%)
Frame = +1
Query:
3733 PANFCILVETGVFTMLARLVLNSWLRVIRLPWPPRVLGLQA*ATAPG 3873
P F + FTML RLV NSW +VI P PP+VLGLQA ATAPG
Sbjct:
446
PGXFLYFLXRRGFTMLPRLVSNSWAQVILPPRPPKVLGLQAXATAPG 492
Score = 53.9 bits (127), Expect(2) =
7e-023
Identities = 26/44 (59%), Positives =
28/44 (63%)
Frame = +2
Query:
3743 FVFW*RRGFSPCWPGWS*TPGFG*SACLGLLGCWDCRPEPPRPA 3874
F + R G S C PGWS TPG S+ LGL CWD R EPPRPA
Sbjct:
548
FCIFCRDGVSLCCPGWSRTPGLKXSSRLGLPKCWDYRREPPRPA 591
Score = 51.9 bits (122), Expect(2) =
2e-017
Identities = 27/44 (61%), Positives =
28/44 (63%)
Frame = -2
Query:
3874 GRARWLRPAIPAP*EAKASGSPEARSSRPAWPTW*KPPSLPKYK 3743
GRARWL P IPA EA+A GS E
RSSRPAW T P S K
Sbjct:
1
GRARWLTPVIPALWEAEAGGSLEPRSSRPAWATXXNPVSTKNTK 44
Score = 43.4 bits (100), Expect(2) =
7e-016
Identities = 17/24 (70%), Positives =
18/24 (74%)
Frame = +2
Query:
3008 ESLEPGGGGCSEPRLCHCTPAWAT 3079
+ L PGG
GCSEP
HCTPAWAT
Sbjct:
164 DRLSPGGRGCSEPXSRHCTPAWAT
187
Score = 32.1 bits (71), Expect(2) =
7e-014
Identities = 14/23 (60%), Positives =
16/23 (68%)
Frame = -2
Query:
3103 FFETEPRSCCPGWSAMAQSRLTA 3035
FF C
PGWSA+A+SRLTA
Sbjct:
397 FFXDRVSLCRPGWSAVARSRLTA
419
Score = 31.7 bits (70), Expect(2) =
2e-025
Identities = 18/35 (51%), Positives =
21/35 (59%)
Frame = +1
Query:
3022 GRRRLQ*AEIVPLHSSLGNKSEAPSQKKKEFPSAG 3126
GR RLQ A I PLHSSLG+++ P KK
G
Sbjct:
70
GRSRLQXAVIAPLHSSLGDRAR-PCLKKXXXAGRG 103
Score = 22.7 bits (47), Expect(2) =
2e-015
Identities = 9/12 (75%), Positives =
10/12 (83%)
Frame = -3
Query:
3078 VAQAGVQWHNLG 3043
VAQAGVQW + G
Sbjct:
504 VAQAGVQWRDHG
515
>sp|P39192|ALU5_HUMAN
ALU SUBFAMILY SC SEQUENCE CONTAMINATION WARNING ENTRY
Length = 585
Score = 99.1 bits (243), Expect =
4e-019
Identities = 55/86 (63%), Positives =
57/86 (65%), Gaps = 4/86 (4%)
Frame = +1
Query:
3616 QAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVETGVFTMLARLVL
3795
QAGV WR L SLQPP PGF+RF
LSLPSSWDYR P PANFCI GV
Sbjct:
403
QAGVQWRDLGSLQPPPPGFKRFSCLSLPSSWDYRRAPPRPANFCIFSRDGVSPCWP----
458
Query:
3796 NSWLR----VIRLPWPPRVLGLQA*ATAPG 3873
W R VIR P
PP+VLGLQA ATAPG
Sbjct:
459 -GWSRSLDLVIRPPRPPKVLGLQAXATAPG
487
Score = 88.5 bits (216), Expect =
6e-016
Identities = 54/101 (53%), Positives =
64/101 (62%), Gaps = 1/101 (0%)
Frame = -3
Query:
3873 AGRGGSGLQSQHPRRPRQADHPKPGVQDQPG-QHGENPRLYQNTKISWA*WQVPIIPATR
3697
AGRGGS L SQH RPR+ADH + +P NP +NTKISWA W+
P++PATR
Sbjct:
99
AGRGGSRLXSQHFGRPRRADHEVK--RSRPSWPTWXNPVSTKNTKISWAWWRAPVVPATR
156
Query:
3696 EAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQKKKRPP 3571
EAE ES EP R LQ AE+AP HSSL + R
+ KK
P
Sbjct:
157
EAEAGESLEPGRRRLQXAEIAPLHSSLAT-ERDSVSKKXXXP 197
Score = 85.8 bits (209), Expect =
4e-015
Identities = 50/96 (52%), Positives =
55/96 (57%)
Frame = -1
Query:
3872 PGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVKTPVSTKIQKLAGHDGRCL*SQXXXX
3693
PGAVA ACNPSTLGG+G RITRS++ + +TP KIQKLAG G
L SQ
Sbjct:
197
PGAVAHACNPSTLGGRGGRITRSRD-RDHPGQHGETPSLLKIQKLAGRGGARLXSQLLGR
255
Query:
3692 XXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVSKK 3585
NPG GGCSE R RH TPAW
KK
Sbjct:
256
LRQENRLNPGGGGCSEPRSRHCTPAWRQSETPSQKK 291
Score = 83.9 bits (204), Expect =
1e-014
Identities = 51/86 (59%), Positives =
51/86 (59%), Gaps = 1/86 (1%)
Frame = +2
Query:
3617 RLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGFSPC-WPGWS
3793
RLEC GAISA CN L GS DS SASRVAG G
HHAQLIFVF
GF
G
Sbjct:
501
RLECSGAISAHCNLRLPGSSDSPASASRVAGTTGARHHAQLIFVFLVETGFHHVGQDGLD
560
Query:
3794 *TPGFG*SACLGLLGCWDCRPEPPRPA 3874
SA LGL CWD R
EPPRPA
Sbjct:
561 LLTSX--SARLGLPKCWDYRREPPRPA
585
Score = 74.5 bits (180), Expect =
1e-011
Identities = 46/87 (52%), Positives =
52/87 (58%)
Frame = -2
Query:
3874 GRARWLRPAIPAP*EAKASGSPEARSSRPAWPTW*KPPSLPKYKN*LGMMAGAYNPSYSG
3695
GRARWL P IPA EA+A GS +
KP KYKN LG++A A
+PSYSG
Sbjct:
1
GRARWLTPVIPALWEAEAGGS-RGQEIETILANMVKPRLYXKYKNXLGVVARACSPSYSG
59
Query:
3694 G*DGRIA*TQEMVVAASGDGATTLQPG 3614
G RIA T+E VA S D AT LQPG
Sbjct:
60
GXGRRIAXTREAEVAVSRDRATALQPG 86
Score = 67.1 bits (161), Expect(3) =
2e-021
Identities = 29/48 (60%), Positives =
35/48 (72%)
Frame = +2
Query:
2882 EVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREAAAGESLEPG 3025
EV+ R +W TW NPVS ++ + WWR PV+PATREA
AGESLEPG
Sbjct:
120
EVKRSRPSWPTWXNPVSTKNTKISWAWWRAPVVPATREAEAGESLEPG
167
Score = 67.1 bits (161), Expect =
2e-009
Identities = 29/33 (87%), Positives =
30/33 (90%)
Frame = -1
Query:
353 GGSRL*SQHFGRPRRADQEVRRSRPSWPTW*NP 255
GGSRL SQHFGRPRRAD
EV+RSRPSWPTW NP
Sbjct:
102 GGSRLXSQHFGRPRRADHEVKRSRPSWPTWXNP 134
Score = 66.3 bits (159), Expect =
3e-009
Identities = 30/33 (90%), Positives =
30/33 (90%)
Frame = +1
Query:
256 GFHHVGQDGLDLLTS*SALLGLPKCCDYRREPP 354
GFHHVGQDGLDLLTS SA LGLPKC DYRREPP
Sbjct:
550 GFHHVGQDGLDLLTSXSARLGLPKCWDYRREPP 582
Score = 64.8 bits (155), Expect =
8e-009
Identities = 28/36 (77%), Positives =
32/36 (88%)
Frame = -2
Query:
355 AVAHACNRSTLGGQGGQIKRLGDQDHPGQHGETPNL 248
AVAHACN STLGG+GG+I R
D+DHPGQHGETP+L
Sbjct:
199 AVAHACNPSTLGGRGGRITRSRDRDHPGQHGETPSL 234
Score = 64.4 bits (154), Expect =
1e-008
Identities = 43/97 (44%), Positives =
50/97 (51%)
Frame = +3
Query:
3582 FFFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRD
3761
FF ++LS PGWS VA
S L AT+ S VQAIL QPPE LGL A A PS FLYF
Sbjct:
295
FFLRRSLALS-PGWSAVARSRLTATSASRVQAILLPQPPEXLGLQARATTPSXFLYFXXR
353
Query:
3762 GGFHHVGQAGLELLASGDPXXXXXXXXXXXXXXHRAR 3872
GF + + + + DP HRAR
Sbjct:
354
RGFTMLARM-VSISXPRDPPASASQSAGITGVSHRAR 389
Score = 57.4 bits (136), Expect =
1e-006
Identities = 27/33 (81%), Positives =
29/33 (87%)
Frame = -3
Query:
354 RWLTPVIAALWEAKEGRSRG*EIKTILANMVKP 256
RWLTPVI ALWEA+ G SRG EI+TILANMVKP
Sbjct:
4
RWLTPVIPALWEAEAGGSRGQEIETILANMVKP 36
Score = 52.7 bits (124), Expect =
4e-005
Identities = 28/41 (68%), Positives =
29/41 (70%)
Frame = +2
Query:
254 RGFTMLARMVLIS*PLDLPSLASQSAAITGVSHRTGLISLF 376
RGFTMLARMV IS P D P+
ASQSA ITGVSHR
F
Sbjct:
354 RGFTMLARMVSISXPRDPPASASQSAGITGVSHRARXXXFF 394
Score = 52.3 bits (123), Expect(3) =
3e-016
Identities = 28/45 (62%), Positives =
31/45 (68%)
Frame = +1
Query:
2887 QEFESSLANMVKPCFC*KCRKLPGVVAHACNPSYSGGCGGRIA*T 3021
QE E+ LANMVKP K
+ GVVA AC+PSYSGG G RIA
T
Sbjct:
24
QEIETILANMVKPRLYXKYKNXLGVVARACSPSYSGGXGRRIAXT 68
Score = 51.2 bits (120), Expect(2) =
2e-006
Identities = 22/34 (64%), Positives =
25/34 (72%)
Frame = -2
Query:
2983 WDYRRAPPHPVIFCTSSRNRVSPC*PGCSQTPDL 2882
WDYRRAPP P FC SR+ VSPC PG S++ DL
Sbjct:
433
WDYRRAPPRPANFCIFSRDGVSPCWPGWSRSLDL 466
Score = 47.3 bits (110), Expect(3) =
6e-016
Identities = 22/36 (61%), Positives =
23/36 (63%)
Frame = -3
Query:
2991 RVAGITGVRHHTR*FSALLAETGFHHVSQAALKLLT 2884
RVAG TG RHH +
L ETGFHHV Q L
LLT
Sbjct:
528
RVAGTTGARHHAQLIFVFLVETGFHHVGQDGLDLLT 563
Score = 46.9 bits (109), Expect(3) =
3e-016
Identities = 20/20 (100%), Positives =
20/20 (100%)
Frame = +2
Query:
2819 RARWLTPVIPALWEAEAGGS 2878
RARWLTPVIPALWEAEAGGS
Sbjct:
2 RARWLTPVIPALWEAEAGGS
21
Score = 44.9 bits (104), Expect(2) =
6e-006
Identities = 17/20 (85%), Positives =
17/20 (85%)
Frame = +2
Query:
3014 LEPGGGGCSEPRLCHCTPAW 3073
L PGGGGCSEPR
HCTPAW
Sbjct:
262 LNPGGGGCSEPRSRHCTPAW
281
Score = 43.4 bits (100), Expect(3) =
2e-021
Identities = 19/26 (73%), Positives =
22/26 (84%)
Frame = +3
Query:
2802 RKNFPAGRGGSRL*SRHFGRPRQADH 2879
+K AGRGGSRL
S+HFGRPR+ADH
Sbjct:
94 KKXXXAGRGGSRLXSQHFGRPRRADH
119
Score = 41.4 bits (95), Expect(3) =
6e-016
Identities = 18/20 (90%), Positives =
18/20 (90%)
Frame = -2
Query:
2875 SACLGLPKCRDYRREPPRPA 2816
SA LGLPKC DYRREPPRPA
Sbjct:
566 SARLGLPKCWDYRREPPRPA
585
Score = 39.9 bits (91), Expect(3) =
6e-016
Identities = 20/34 (58%), Positives =
23/34 (66%)
Frame = -1
Query:
3122 AEGNSFFF*DGASLLLPRLECNGTISAHCNLRLP 3021
A G FF + S
+ RLEC+G ISAHCNLRLP
Sbjct:
485
APGXXXFF-ETESRSVARLECSGAISAHCNLRLP 517
Score = 37.9 bits (86), Expect(3) =
5e-006
Identities = 24/47 (51%), Positives =
30/47 (63%)
Frame = -1
Query:
3020 VQAIXXXXXXXXXXXQACATTPGNFLHF*QKQGFTMLARLLSNS*PQ 2880
VQAI
QA ATTP FL+F ++GFTMLAR++S S P+
Sbjct:
323
VQAILLPQPPEXLGLQARATTPSXFLYFXXRRGFTMLARMVSISXPR 369
Score = 37.1 bits (84), Expect(3) =
2e-021
Identities = 21/37 (56%), Positives =
24/37 (64%)
Frame = +1
Query:
3022 GRRRLQ*AEIVPLHSSLGNKSEAPSQKKKEFPSAGDH 3132
GRRRLQ AEI
PLHSSL + ++ S KK P A H
Sbjct:
167
GRRRLQXAEIAPLHSSLATERDSVS-KKXXXPGAVAH 202
Score = 31.3 bits (69), Expect(3) =
5e-006
Identities = 14/24 (58%), Positives =
17/24 (70%)
Frame = -2
Query:
3103 FFETEPRSCCPGWSAMAQSRLTAT 3032
FF + PGWSA+A+SRLTAT
Sbjct:
295 FFLRRSLALSPGWSAVARSRLTAT
318
Score = 30.5 bits (67), Expect(3) =
3e-016
Identities = 15/20 (75%), Positives =
16/20 (80%)
Frame = +3
Query:
3027 AEVAVSRDCAIALQPGQQER 3086
AEVAVSRD A ALQPG + R
Sbjct:
71 AEVAVSRDRATALQPGDRAR
90
Score = 29.7 bits (65), Expect(2) =
6e-006
Identities = 19/46 (41%), Positives =
22/46 (47%)
Frame = +3
Query:
2820 GRGGSRL*SRHFGRPRQADHLRSGV*EQPG*HGETLFLLEVQKITG 2957
GRGG
R R DH PG
HGET LL++QK+
G
Sbjct:
211
GRGG------RITRSRDRDH--------PGQHGETPSLLKIQKLAG 242
Score = 25.1 bits (53), Expect(2) =
2e-006
Identities = 10/20 (50%), Positives =
13/20 (65%)
Frame = -3
Query:
3102 FLRRSLALVAQAGVQWHNLG 3043
F ++L QAGVQW +LG
Sbjct:
393 FFXDGVSLCRQAGVQWRDLG
412
Score = 24.7 bits (52), Expect(3) =
5e-006
Identities = 11/15 (73%), Positives =
11/15 (73%)
Frame = -3
Query:
2847 GITGVSHRARLGNSF 2803
GITGVSHRAR
F
Sbjct:
380 GITGVSHRARXXXFF
394
>sp|P39189|ALU2_HUMAN
ALU SUBFAMILY SB SEQUENCE CONTAMINATION WARNING ENTRY
Length = 587
Score = 106 bits (263), Expect =
2e-021
Identities = 63/106 (59%), Positives =
64/106 (59%), Gaps = 4/106 (3%)
Frame = +1
Query:
3556 GFSRCGWSFFFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCP
3735
G S
F ETESRS AQAGV WR L SLQ P PGF
F LSLPSSWDYR P
P
Sbjct:
483
GVSHRARXXXFFETESRSVAQAGVQWRDLGSLQAPPPGFTPFSCLSLPSSWDYRRPPPRP
542
Query:
3736 ANFCILVETGVFTMLARLVLNSWLR----VIRLPWPPRVLGLQA*ATAPG
3873
ANFCI GV
W R VIR P
PP+VLGLQA ATAPG
Sbjct:
543
ANFCIFSRDGVSPCXP-----GWSRSPDLVIRPPRPPKVLGLQAXATAPG
587
Score = 96.3 bits (236), Expect =
3e-018
Identities = 56/96 (58%), Positives =
60/96 (62%)
Frame = -1
Query:
3872 PGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVKTPVSTKIQKLAGHDGRCL*SQXXXX
3693
PGAVA ACNPSTLGG+G RITRS + + +TP KIQKLAG G
L SQ
Sbjct:
198
PGAVAHACNPSTLGGRGGRITRSGD-RDHPGXHGETPSLLKIQKLAGRGGGRLXSQLLGR
256
Query:
3692 XXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVSKK 3585
NPG G CSE R RH TPAWA ERDSVSKK
Sbjct:
257
LRQENGVNPGGGACSEPRSRHCTPAWATERDSVSKK 292
Score = 92.4 bits (226), Expect =
4e-017
Identities = 56/100 (56%), Positives =
65/100 (65%), Gaps = 1/100 (1%)
Frame = -3
Query:
3873 AGRGGSGLQSQHPRRPRQADHPKPGVQDQPGQHGE-NPRLYQNTKISWA*WQVPIIPATR
3697
AGRGGS L SQH RPR+ADH + +P NP +NTKIS A W+
P++PATR
Sbjct:
100
AGRGGSRLXSQHFGRPRRADHEVR--RSRPSWLTRXNPVSTKNTKISRAWWRAPVVPATR
157
Query:
3696 EAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQKKKRP 3574
EAE E EP R LQ AE+AP HSSLG ARLRL+K P
Sbjct:
158
EAEAGEWREPGRRSLQXAEIAPLHSSLGDRARLRLKKXXXP 198
Score = 89.3 bits (218), Expect =
3e-016
Identities = 56/99 (56%), Positives =
57/99 (57%), Gaps = 1/99 (1%)
Frame = +2
Query:
3593 RRSLAQLPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGF-
3769
RRSLA PRLEC GAISA C L GS S
SASRVAG G HHA+LIFVF GF
Sbjct:
299
RRSLALSPRLECSGAISAHCKLRLPGSRHSPASASRVAGTTGARHHARLIFVFLVETGFH
358
Query:
3770 SPCWPGWS*TPGFG*SACLGLLGCWDCRPEPPRPAPYGFF 3889
G
SA LGL CWD R EPPRPA FF
Sbjct:
359
RVSQDGLDLLTSX--SARLGLPKCWDYRREPPRPAXXXFF 396
Score = 81.5 bits (198), Expect =
7e-014
Identities = 49/94 (52%), Positives =
58/94 (61%)
Frame = -2
Query:
3874 GRARWLRPAIPAP*EAKASGSPEARSSRPAWPTW*KPPSLPKYKN*LGMMAGAYNPSYSG
3695
GRARWL P IPA EA+A GS +
KP KYKN G++AGA +PSYSG
Sbjct:
1
GRARWLTPVIPALWEAEAGGS-RGQEIETILANTVKPRLYXKYKNXPGVVAGACSPSYSG
59
Query:
3694 G*DGRIA*TQEMVVAASGDGATTLQPGQLSETPS 3593
G R+A T+E +A S D AT LQPG+
SETPS
Sbjct:
60
GXGRRMAXTREAELAVSRDRATALQPGRQSETPS 93
Score = 72.2 bits (174), Expect =
5e-011
Identities = 44/96 (45%), Positives =
50/96 (51%)
Frame = +3
Query:
3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG
3764
FF DGVSL PGWS VA S L A++ S V
AIL QPPE LGL APA P
FLYF
Sbjct:
395
FFXDGVSLCRPGWSAVARSRLTASSASRVHAILLPQPPEXLGLQAPATTPGXFLYFXXRR
454
Query:
3765 GFHHVGQAGLELLASGDPXXXXXXXXXXXXXXHRAR 3872
GF + + + + DP
HRAR
Sbjct:
455
GFTVLARM-VSISXPRDPPASASQSAGITGVSHRAR 489
Score = 65.6 bits (157), Expect =
5e-009
Identities = 28/36 (77%), Positives =
32/36 (88%)
Frame = -2
Query:
355 AVAHACNRSTLGGQGGQIKRLGDQDHPGQHGETPNL 248
AVAHACN STLGG+GG+I R GD+DHPG HGETP+L
Sbjct:
200 AVAHACNPSTLGGRGGRITRSGDRDHPGXHGETPSL 235
Score = 63.6 bits (152), Expect(3) =
5e-020
Identities = 29/48 (60%), Positives =
34/48 (70%)
Frame = +2
Query:
2882 EVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREAAAGESLEPG 3025
EVR R +WLT NPVS ++ + R WWR PV+PATREA AGE EPG
Sbjct:
121
EVRRSRPSWLTRXNPVSTKNTKISRAWWRAPVVPATREAEAGEWREPG
168
Score = 61.7 bits (147), Expect(2) =
7e-016
Identities = 37/80 (46%), Positives =
43/80 (53%)
Frame = +1
Query:
2887 QEFESSLANMVKPCFC*KCRKLPGVVAHACNPSYSGGCGGRIA*TGRRRLQ*AEIVPLHS
3066
QE E+ LAN VKP K
+ PGVVA AC+PSYSGG G R+A T L +
Sbjct:
24
QEIETILANTVKPRLYXKYKNXPGVVAGACSPSYSGGXGRRMAXTREAELAVSRDRATAL
83
Query:
3067 SLGNKSEAPSQKKKEFPSAG 3126
G +SE PSQKK
G
Sbjct:
84 QPGRQSETPSQKKXXXAGRG
103
Score = 60.9 bits (145), Expect =
1e-007
Identities = 28/33 (84%), Positives =
28/33 (84%)
Frame = +1
Query:
256 GFHHVGQDGLDLLTS*SALLGLPKCCDYRREPP 354
GFH V QDGLDLLTS SA LGLPKC DYRREPP
Sbjct:
356 GFHRVSQDGLDLLTSXSARLGLPKCWDYRREPP 388
Score = 60.5 bits (144), Expect =
2e-007
Identities = 30/42 (71%), Positives =
31/42 (73%)
Frame = -1
Query:
380 QRKEKLGQCGGSRL*SQHFGRPRRADQEVRRSRPSWPTW*NP 255
Q+K
GGSRL SQHFGRPRRAD EVRRSRPSW T
NP
Sbjct:
94
QKKXXXAGRGGSRLXSQHFGRPRRADHEVRRSRPSWLTRXNP 135
Score = 55.0 bits (130), Expect =
7e-006
Identities = 26/33 (78%), Positives =
28/33 (84%)
Frame = -3
Query:
354 RWLTPVIAALWEAKEGRSRG*EIKTILANMVKP 256
RWLTPVI ALWEA+ G SRG EI+TILAN VKP
Sbjct:
4
RWLTPVIPALWEAEAGGSRGQEIETILANTVKP 36
Score = 53.5 bits (126), Expect =
2e-005
Identities = 30/74 (40%), Positives =
33/74 (44%)
Frame = -2
Query:
3103 FFETEPRSCCPGWSAMAQSRLTATXXXXXXXXXXXXXXXSWDYRRAPPHPVIFCTSSRNR
2924
FFETE RS
SWDYRR PP P FC SR+
Sbjct:
493
FFETESRSVAQAGVQWRDLGSLQAPPPGFTPFSCLSLPSSWDYRRPPPRPANFCIFSRDG
552
Query:
2923 VSPC*PGCSQTPDL 2882
VSPC PG S++PDL
Sbjct:
553 VSPCXPGWSRSPDL
566
Score = 52.3 bits (123), Expect(2) =
8e-012
Identities = 33/74 (44%), Positives =
34/74 (45%)
Frame = -3
Query:
3105 FFLRRSLALVAQAGVQWHNLGXXXXXXXXXXXXXXXXSRVAGITGVRHHTR*FSALLAET
2926
FFLRRSLAL +
SRVAG TG RHH R
L ET
Sbjct:
296
FFLRRSLALSPRLECSGAISAHCKLRLPGSRHSPASASRVAGTTGARHHARLIFVFLVET
355
Query:
2925 GFHHVSQAALKLLT 2884
GFH VSQ L
LLT
Sbjct:
356 GFHRVSQDGLDLLT
369
Score = 46.9 bits (109), Expect(2) =
7e-016
Identities = 20/20 (100%), Positives =
20/20 (100%)
Frame = +2
Query:
2819 RARWLTPVIPALWEAEAGGS 2878
RARWLTPVIPALWEAEAGGS
Sbjct:
2 RARWLTPVIPALWEAEAGGS
21
Score = 44.9 bits (104), Expect(2) =
7e-009
Identities = 17/22 (77%), Positives =
18/22 (81%)
Frame = +2
Query:
3014 LEPGGGGCSEPRLCHCTPAWAT 3079
+ PGGG CSEPR
HCTPAWAT
Sbjct:
263 VNPGGGACSEPRSRHCTPAWAT
284
Score = 43.8 bits (101), Expect(3) =
5e-020
Identities = 28/51 (54%), Positives =
34/51 (65%), Gaps = 4/51 (7%)
Frame = +3
Query:
2727 ALLRNAAQILTAD-ATLLCSG---ESTI*RKNFPAGRGGSRL*SRHFGRPRQADH
2879
A R A ++ D AT L G E+ +K AGRGGSRL
S+HFGRPR+ADH
Sbjct:
66
AXTREAELAVSRDRATALQPGRQSETPSQKKXXXAGRGGSRLXSQHFGRPRRADH
120
Score = 42.6 bits (98), Expect(2) =
8e-012
Identities = 19/24 (79%), Positives =
19/24 (79%)
Frame = -2
Query:
2875 SACLGLPKCRDYRREPPRPAGKFF 2804
SA LGLPKC DYRREPPRPA
F
Sbjct:
372 SARLGLPKCWDYRREPPRPAXXXF
395
Score = 39.9 bits (91), Expect(2) =
7e-009
Identities = 18/26 (69%), Positives =
19/26 (72%)
Frame = +1
Query:
2953 PGVVAHACNPSYSGGCGGRIA*TGRR 3030
PG VAHACNPS GG GGRI +G R
Sbjct:
198 PGAVAHACNPSTLGGRGGRITRSGDR
223
Score = 35.2 bits (79), Expect(3) =
5e-020
Identities = 20/37 (54%), Positives =
23/37 (62%)
Frame = +1
Query:
3022 GRRRLQ*AEIVPLHSSLGNKSEAPSQKKKEFPSAGDH 3132
GRR LQ AEI PLHSSLG+++ KK P A H
Sbjct:
168
GRRSLQXAEIAPLHSSLGDRARL-RLKKXXXPGAVAH 203
>sp|P39190|ALU3_HUMAN
ALU SUBFAMILY SB1 SEQUENCE CONTAMINATION WARNING ENTRY
Length = 587
Score = 106 bits (263), Expect =
2e-021
Identities = 63/106 (59%), Positives =
64/106 (59%), Gaps = 4/106 (3%)
Frame = +1
Query:
3556 GFSRCGWSFFFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCP
3735
G S
F ETESRS AQAGV WR L SLQ P PGF
F LSLPSSWDYR P
P
Sbjct:
483
GVSHRARXXXFFETESRSVAQAGVQWRDLGSLQAPPPGFTPFSCLSLPSSWDYRRPPLRP
542
Query:
3736 ANFCILVETGVFTMLARLVLNSWLR----VIRLPWPPRVLGLQA*ATAPG
3873
ANFCI GV
W R VIR P
PP+VLGLQA ATAPG
Sbjct:
543
ANFCIFSRDGVSPFXP-----GWSRSPDLVIRPPRPPKVLGLQAXATAPG
587
Score = 97.1 bits (238), Expect =
2e-018
Identities = 57/96 (59%), Positives =
60/96 (62%)
Frame = -1
Query:
3872 PGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVKTPVSTKIQKLAGHDGRCL*SQXXXX
3693
PGAVA ACNPSTLGG+G RITRS + N +TP KIQKLAG G
L SQ
Sbjct:
198
PGAVAHACNPSTLGGRGGRITRSGDRDHPGXNG-ETPSLLKIQKLAGRSGGRLXSQLLGR
256
Query:
3692 XXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVSKK 3585
NPG G CSE R RH TPAWA ERDSVSKK
Sbjct:
257
LRQENGVNPGGGACSEPRSRHCTPAWATERDSVSKK 292
Score = 88.9 bits (217), Expect =
4e-016
Identities = 54/100 (54%), Positives =
64/100 (64%), Gaps = 1/100 (1%)
Frame = -3
Query:
3873 AGRGGSGLQSQHPRRPRQADHPKPGVQDQPGQ-HGENPRLYQNTKISWA*WQVPIIPATR
3697
AGRGGS L SQH RPR+ADH + +P + NP +NTKIS A W+ P++PAT
Sbjct:
100
AGRGGSRLXSQHFGRPRRADHEVR--RSRPSRLKRXNPVSTKNTKISRAXWRAPVVPATW
157
Query:
3696 EAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQKKKRP 3574
EAE E EP R LQ AE+ P HSSLG ARLRL+K P
Sbjct:
158
EAEAGEWREPGRRSLQXAEIPPLHSSLGDRARLRLKKXXXP 198
Score = 83.5 bits (203), Expect =
2e-014
Identities = 53/99 (53%), Positives =
56/99 (56%), Gaps = 1/99 (1%)
Frame = +2
Query:
3593 RRSLAQLPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGFS
3772
RRSLA PRLEC G ISA C L GS S
SAS+VAG G H+A+LIFVF GF
Sbjct:
299
RRSLALSPRLECSGGISAHCKLRLPGSRHSPASASQVAGTTGARHYARLIFVFLVETGFH
358
Query:
3773 P-CWPGWS*TPGFG*SACLGLLGCWDCRPEPPRPAPYGFF 3889
G
SA LGL CWD R EPPRPA FF
Sbjct:
359
RFSRDGLDLLTSX--SARLGLPKCWDYRREPPRPAXXXFF 396
Score = 79.2 bits (192), Expect =
4e-013
Identities = 50/94 (53%), Positives =
60/94 (63%), Gaps = 1/94 (1%)
Frame = -2
Query:
3874 GRARWLRPAIPAP*EAKASGSP-EARSSRPAWPTW*KPPSLPKYKN*LGMMAGAYNPSYS
3698
GRARWL P IPA EA+A GS + + PA KP KYKN G++AGA +PSY
Sbjct:
1
GRARWLTPVIPALWEAEAGGSRGQEIETIPAKTV--KPRLYXKYKNXPGVVAGACSPSYL
58
Query:
3697 GG*DGRIA*TQEMVVAASGDGATTLQPGQLSETPS 3593
GG R+A T+E +A S D AT LQPG+
SETPS
Sbjct:
59
GGXGRRMAXTREAELAVSRDPATALQPGRQSETPS 93
Score = 69.9 bits (168), Expect =
2e-010
Identities = 44/96 (45%), Positives =
49/96 (50%)
Frame = +3
Query:
3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG
3764
FF DGVSL PGWS VA S L A++ S V
AIL QPP+ LGL APA P
FLYF
Sbjct:
395
FFXDGVSLCRPGWSAVAGSRLTASSASRVHAILLPQPPKXLGLQAPATTPGXFLYFXXRR
454
Query:
3765 GFHHVGQAGLELLASGDPXXXXXXXXXXXXXXHRAR 3872
GF V + + DP
HRAR
Sbjct:
455
GF-TVLAGMVSISXPRDPPASASQSAGITGVSHRAR 489
Score = 62.8 bits (150), Expect =
3e-008
Identities = 27/36 (75%), Positives =
32/36 (88%)
Frame = -2
Query:
355 AVAHACNRSTLGGQGGQIKRLGDQDHPGQHGETPNL 248
AVAHACN STLGG+GG+I R GD+DHPG +GETP+L
Sbjct:
200 AVAHACNPSTLGGRGGRITRSGDRDHPGXNGETPSL 235
Score = 57.4 bits (136), Expect =
1e-006
Identities = 26/33 (78%), Positives =
27/33 (81%)
Frame = +1
Query:
256 GFHHVGQDGLDLLTS*SALLGLPKCCDYRREPP 354
GFH +DGLDLLTS SA
LGLPKC DYRREPP
Sbjct:
356 GFHRFSRDGLDLLTSXSARLGLPKCWDYRREPP 388
Score = 54.7 bits (129), Expect(2) =
9e-014
Identities = 34/80 (42%), Positives =
40/80 (49%)
Frame = +1
Query:
2887 QEFESSLANMVKPCFC*KCRKLPGVVAHACNPSYSGGCGGRIA*TGRRRLQ*AEIVPLHS
3066
QE E+ A VKP K + PGVVA AC+PSY GG G R+A T L +
Sbjct:
24
QEIETIPAKTVKPRLYXKYKNXPGVVAGACSPSYLGGXGRRMAXTREAELAVSRDPATAL
83
Query:
3067 SLGNKSEAPSQKKKEFPSAG 3126
G +SE PSQKK
G
Sbjct:
84 QPGRQSETPSQKKXXXAGRG
103
Score = 53.1 bits (125), Expect =
3e-005
Identities = 26/35 (74%), Positives =
27/35 (76%)
Frame = -1
Query:
380 QRKEKLGQCGGSRL*SQHFGRPRRADQEVRRSRPS 276
Q+K
GGSRL SQHFGRPRRAD EVRRSRPS
Sbjct:
94
QKKXXXAGRGGSRLXSQHFGRPRRADHEVRRSRPS 128
Score = 47.6 bits (111), Expect(3) =
2e-015
Identities = 25/48 (52%), Positives =
30/48 (62%)
Frame = +2
Query:
2882 EVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREAAAGESLEPG 3025
EVR R + L NPVS ++ + R
WR PV+PAT EA AGE
EPG
Sbjct:
121
EVRRSRPSRLKRXNPVSTKNTKISRAXWRAPVVPATWEAEAGEWREPG
168
Score = 46.9 bits (109), Expect(2) =
9e-014
Identities = 20/20 (100%), Positives =
20/20 (100%)
Frame = +2
Query:
2819 RARWLTPVIPALWEAEAGGS 2878
RARWLTPVIPALWEAEAGGS
Sbjct:
2 RARWLTPVIPALWEAEAGGS
21
Score = 44.9 bits (104), Expect(2) =
9e-010
Identities = 29/74 (39%), Positives =
33/74 (44%)
Frame = -3
Query:
3105 FFLRRSLALVAQAGVQWHNLGXXXXXXXXXXXXXXXXSRVAGITGVRHHTR*FSALLAET
2926
FFLRRSLAL +
S+VAG TG RH+ R
L ET
Sbjct:
296
FFLRRSLALSPRLECSGGISAHCKLRLPGSRHSPASASQVAGTTGARHYARLIFVFLVET
355
Query:
2925 GFHHVSQAALKLLT 2884
GFH S+ L LLT
Sbjct:
356 GFHRFSRDGLDLLT
369
Score = 44.9 bits (104), Expect(2) =
7e-009
Identities = 17/22 (77%), Positives =
18/22 (81%)
Frame = +2
Query:
3014 LEPGGGGCSEPRLCHCTPAWAT 3079
+ PGGG CSEPR
HCTPAWAT
Sbjct:
263 VNPGGGACSEPRSRHCTPAWAT
284
Score = 44.5 bits (103), Expect(3) =
2e-015
Identities = 35/75 (46%), Positives =
41/75 (54%), Gaps = 4/75 (5%)
Frame = +3
Query:
2655 VGGRCFQGKPSYLFPRTLCCSEDTALLRNAAQILTAD-ATLLCSG---ESTI*RKNFPAG
2822
V G C PSYL
A R A ++ D AT L G E+ +K AG
Sbjct:
49
VAGAC---SPSYLGGX----GRRMAXTREAELAVSRDPATALQPGRQSETPSQKKXXXAG
101
Query:
2823 RGGSRL*SRHFGRPRQADH 2879
RGGSRL S+HFGRPR+ADH
Sbjct:
102 RGGSRLXSQHFGRPRRADH
120
Score = 43.0 bits (99), Expect(2) =
9e-010
Identities = 27/49 (55%), Positives =
32/49 (65%), Gaps = 3/49 (6%)
Frame = -2
Query:
2875 SACLGLPKCRDYRREPPRPAGKFFLYIVLS---PEQSRVASAVRICAAFLSK
2729
SA LGLPKC DYRREPPRPA
F +S P S VA + R+ A+ S+
Sbjct:
372
SARLGLPKCWDYRREPPRPAXXXFFXDGVSLCRPGWSAVAGS-RLTASSASR
422
Score = 39.9 bits (91), Expect(2) =
7e-009
Identities = 18/26 (69%), Positives =
19/26 (72%)
Frame = +1
Query:
2953 PGVVAHACNPSYSGGCGGRIA*TGRR 3030
PG VAHACNPS GG GGRI +G R
Sbjct:
198 PGAVAHACNPSTLGGRGGRITRSGDR
223
Score = 34.4 bits (77), Expect(3) =
2e-015
Identities = 20/37 (54%), Positives =
23/37 (62%)
Frame = +1
Query:
3022 GRRRLQ*AEIVPLHSSLGNKSEAPSQKKKEFPSAGDH 3132
GRR LQ AEI PLHSSLG+++ KK P A H
Sbjct:
168
GRRSLQXAEIPPLHSSLGDRARL-RLKKXXXPGAVAH 203
>ref|NP_060265.1||
hypothetical protein FLJ20378 >gi|7020440|dbj|BAA91131.1|
(AK000385)
unnamed protein product [Homo sapiens]
Length = 152
Score = 83.1 bits (202), Expect(2) =
2e-021
Identities = 39/62 (62%), Positives =
43/62 (68%)
Frame = +1
Query:
3580 FFFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVE
3759
FFFL
AQAGV WR+L SLQPP PGF++F LSL
SSWDYRH P CPA F
LV+
Sbjct:
24
FFFLRQSFALVAQAGVQWRNLGSLQPPPPGFKQFSCLSLLSSWDYRHAPPCPAYFVFLVD
83
Query:
3760 TG 3765
G
Sbjct:
84 MG
85
Score = 60.1 bits (143), Expect =
2e-007
Identities = 39/98 (39%), Positives =
45/98 (45%)
Frame = -3
Query:
3111 FFFFLRRSLALVAQAGVQWHNLGXXXXXXXXXXXXXXXXSRVAGITGVRHHTR*FSALLA
2932
FFFFLR+S ALVAQAGVQW NLG
+
+ L
Sbjct:
23
FFFFLRQSFALVAQAGVQWRNLGSLQPPPPGFKQFSCLSLLSSWDYRHAPPCPAYFVFLV
82
Query:
2931 ETGFHHVSQAALKLLTXXXXXXXXXXXAGITGVSHRAR 2818
+ GF HV Q L+LLT
AGITG SHRA+
Sbjct:
83
DMGFPHVGQTGLELLTSGDPPASASQSAGITGGSHRAQ 120
Score = 44.1 bits (102), Expect(2) =
2e-021
Identities = 25/57 (43%), Positives =
28/57 (48%)
Frame = +3
Query:
3741 FLYFGRDGGFHHVGQAGLELLASGDPXXXXXXXXXXXXXXHRARPLMGSSTLLGSLF
3911
+ F D GF HVGQ GLELL SGDP
HRA+P SS G +F
Sbjct:
77
YFVFLVDMGFPHVGQTGLELLTSGDPPASASQSAGITGGSHRAQPT--SSNPYGIVF
131
>sp|P39195|ALU8_HUMAN
ALU SUBFAMILY SX SEQUENCE CONTAMINATION WARNING ENTRY
Length = 591
Score = 92.4 bits (226), Expect(2) =
3e-021
Identities = 44/61 (72%), Positives =
45/61 (73%)
Frame = +1
Query:
3586 FLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVETG
3765
F ETESRS AQAGV WR L SLQPP PGF+RF
LSLPSSWDYR P PANFCI G
Sbjct:
496
FFETESRSVAQAGVQWRDLGSLQPPPPGFKRFSCLSLPSSWDYRRAPPRPANFCIFSRDG
555
Query:
3766 V 3768
V
Sbjct:
556 V 556
Score = 78.0 bits (189), Expect(3) =
6e-021
Identities = 41/59 (69%), Positives =
42/59 (70%)
Frame = +2
Query:
3593 RRSLAQLPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGF
3769
RRSLA PRLEC GAISA CN L GS DS SASRVAGI G HHA+LIFVF GF
Sbjct:
301
RRSLALSPRLECSGAISAHCNLRLPGSSDSPASASRVAGITGARHHARLIFVFLVETGF
359
Score = 76.9 bits (186), Expect =
2e-012
Identities = 36/52 (69%), Positives =
39/52 (74%)
Frame = +2
Query:
2870 GGSLEVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREAAAGESLEPG
3025
G S EVRS R AW TW NPVS ++ + R
WWR PVIPATREA AGESLEPG
Sbjct:
19
GRSPEVRSSRPAWPTWXNPVSTKNTKISRAWWRAPVIPATREAEAGESLEPG
70
Score = 73.7 bits (178), Expect =
2e-011
Identities = 40/61 (65%), Positives =
45/61 (73%)
Frame = -3
Query:
3768 NPRLYQNTKISWA*WQVPIIPATREAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQ
3589
NP +NTKIS A W+
P+IPATREAE ES EP R LQ AE+AP HSSLG ARLRL+
Sbjct:
36
NPVSTKNTKISRAWWRAPVIPATREAEAGESLEPGRRRLQXAEIAPLHSSLGDRARLRLK
95
Query:
3588 K 3586
K
Sbjct:
96 K 96
Score = 71.0 bits (171), Expect =
1e-010
Identities = 40/73 (54%), Positives =
45/73 (60%)
Frame = +1
Query:
2887 QEFESSLANMVKPCFC*KCRKLPGVVAHACNPSYSGGCGGRIA*TGRRRLQ*AEIVPLHS
3066
QEFE+SLANMVKP K
+ PGVVA ACNPSYSGG G RIA T + +
Sbjct:
222
QEFETSLANMVKPRLYXKYKNXPGVVARACNPSYSGGXGRRIAXTREAEVAVSRDRATAL
281
Query:
3067 SLGNKSEAPSQKK 3105
G +SE PSQKK
Sbjct:
282 QPGRQSETPSQKK
294
Score = 68.3 bits (164), Expect(2) =
5e-013
Identities = 39/62 (62%), Positives =
40/62 (63%)
Frame = +3
Query:
3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG
3764
FF DGVSL PGWS VA S L AT+ S
VQAIL QPPE LGL A A P
FLYF
Sbjct:
397
FFXDGVSLCRPGWSAVARSRLTATSASRVQAILLPQPPEXLGLQARATTPGXFLYFXXRR
456
Query:
3765 GF 3770
GF
Sbjct:
457 GF 458
Score = 66.7 bits (160), Expect(2) =
3e-011
Identities = 37/62 (59%), Positives =
38/62 (60%)
Frame = -1
Query:
3770 KTPVSTKIQKLAGHDGRCL*SQXXXXXXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVS
3591
+TP KIQKLAG G
L SQ
NPG GGCSE R RH TPAWA ERDSVS
Sbjct:
134
ETPSLLKIQKLAGRGGARLXSQLLGRLRQENRLNPGGGGCSEPRSRHCTPAWATERDSVS
193
Query:
3590 KK 3585
KK
Sbjct:
194 KK 195
Score = 64.4 bits (154), Expect(2) =
9e-010
Identities = 45/80 (56%), Positives =
51/80 (63%), Gaps = 1/80 (1%)
Frame = -2
Query:
3769 KPPSLPKYKN*LGMMAGAYNPSYSGG*DGRIA*TQEMVVAASGDGATTLQPGQLSETPSP
3590
KP KYKN G++A A NPSYSGG RIA T+E VA S D AT LQPG+ SETPS
Sbjct:
233
KPRLYXKYKNXPGVVARACNPSYSGGXGRRIAXTREAEVAVSRDRATALQPGRQSETPSQ
292
Query:
3589 XXXXXTHNEKSL-LPPFMENS 3530
+SL L P +E S
Sbjct:
293 KKXXXFFLRRSLALSPRLECS
313
Score = 59.7 bits (142), Expect =
3e-007
Identities = 51/88 (57%), Positives =
58/88 (64%), Gaps = 57/88 (64%)
Frame = +2
Query:
2816 SRARWLTPVIPALWEAEAGGSLEV--RSLRAAWLTW*NPVSARSAENYRVW---------
2962
SRA W PVIPA EAEAG SLE R L+ A + P+ + + R+
Sbjct:
46
SRAWWRAPVIPATREAEAGESLEPGRRRLQXAEIA---PLHSSLGDRARLRLKKXXXAGG
102
Query:
2963 ----WRTPVIPATRE------------AAAGES---------------------------
3013
W
TPVIPA E
GE+
Sbjct:
103
GRARWLTPVIPALWEEDHLRSGVRDQPGQHGETPSLLKIQKLAGRGGARLXSQLLGRLRQ
162
Query:
3014 ---LEPGGGGCSEPRLCHCTPAWAT 3079
L PGGGGCSEPR
HCTPAWAT
Sbjct:
163 ENRLNPGGGGCSEPRSRHCTPAWAT
187
Score = 59.3 bits (141), Expect =
4e-007
Identities = 35/74 (47%), Positives =
37/74 (49%)
Frame = -3
Query:
3105 FFLRRSLALVAQAGVQWHNLGXXXXXXXXXXXXXXXXSRVAGITGVRHHTR*FSALLAET
2926
FFLRRSLAL +
SRVAGITG RHH R
L ET
Sbjct:
298
FFLRRSLALSPRLECSGAISAHCNLRLPGSSDSPASASRVAGITGARHHARLIFVFLVET
357
Query:
2925 GFHHVSQAALKLLT 2884
GFHHV QA L+LLT
Sbjct:
358 GFHHVGQAGLELLT
371
Score = 58.6 bits (139), Expect(2) =
6e-009
Identities = 29/53 (54%), Positives =
34/53 (63%), Gaps = 2/53 (3%)
Frame = -2
Query:
2983 WDYRRAPPHPVIFCTSSRNRVSPC*PGCSQTPDLK*SA--CLGLPKCRDYRREPP
2825
WDYRRAPP P FC SR+ VSPC PG S+TPDL+ S+ G+ R
PP
Sbjct:
536
WDYRRAPPRPANFCIFSRDGVSPCWPGWSRTPDLRXSSSQSAGITGVSHRARPPP
590
Score = 57.4 bits (136), Expect =
1e-006
Identities = 39/81 (48%), Positives =
44/81 (54%)
Frame = -1
Query:
3104 FF*DGASLLLPRLECNGTISAHCNLRLPVQAIXXXXXXXXXXXQACATTPGNFLHF*QKQ
2925
FF DG SL P
VQAI QA
ATTPG FL+F ++
Sbjct:
397
FFXDGVSLCRPGWSAVARSRLTATSASRVQAILLPQPPEXLGLQARATTPGXFLYFXXRR
456
Query:
2924 GFTMLARLLSNS*PQVIRLPR 2862
GFTMLARL+SNS PQVI LP+
Sbjct:
457 GFTMLARLVSNSXPQVIFLPK
477
Score = 37.9 bits (86), Expect(3) =
6e-021
Identities = 16/17 (94%), Positives =
16/17 (94%)
Frame = +3
Query:
3765 GFHHVGQAGLELLASGD 3815
GFHHVGQAGLELL SGD
Sbjct:
358 GFHHVGQAGLELLTSGD
374
Score = 34.4 bits (77), Expect(2) =
3e-021
Identities = 13/20 (65%), Positives =
14/20 (70%)
Frame = +2
Query:
3743 FVFW*RRGFSPCWPGWS*TP 3802
F + R G SPCWPGWS
TP
Sbjct:
548 FCIFSRDGVSPCWPGWSRTP
567
Score = 30.5 bits (67), Expect(2) =
5e-013
Identities = 16/27 (59%), Positives =
16/27 (59%), Gaps = 3/27 (11%)
Frame = +2
Query:
3839 CWDCRPEPPRPAP---YGFFYTAGISVLSA 3919
CWD R EPPRPA FF T SV A
Sbjct:
478 CWDYRREPPRPASARXXXFFETESRSVAQA
507
Score = 29.7 bits (65), Expect(3) =
6e-021
Identities = 13/15 (86%), Positives =
14/15 (92%)
Frame = +1
Query:
3829 PPRVLGLQA*ATAPG 3873
PP+VLGLQA ATAPG
Sbjct:
376 PPKVLGLQAXATAPG
390
Score = 26.6 bits (57), Expect(2) =
6e-009
Identities = 21/55 (38%), Positives =
27/55 (48%)
Frame = -3
Query:
3207 VHNASLIIVFL*DCH*KNDKTRELKMISC*GKFFFFLRRSLALVAQAGVQWHNLG
3043
V N+ ++FL C D RE + FF S + VAQAGVQW
+LG
Sbjct:
465
VSNSXPQVIFLPKCW---DYRREPPRPASARXXXFFETESRS-VAQAGVQWRDLG
515
Score = 26.2 bits (56), Expect(2) =
3e-011
Identities = 10/12 (83%), Positives =
10/12 (83%)
Frame = -2
Query:
3874 GRARWLRPAIPA 3839
GRARWL P IPA
Sbjct:
103 GRARWLTPVIPA
114
Score = 23.5 bits (49), Expect(2) =
9e-010
Identities = 10/12 (83%), Positives =
10/12 (83%)
Frame = -3
Query:
3873 AGRGGSGLQSQH 3838
AGRGGS L SQH
Sbjct:
202 AGRGGSRLXSQH
213
Database: nr
Posted date: Oct 24, 2000 1:47 AM
Number of letters in database:
181,542,687
Number of sequences in database: 576,719
Lambda K
H
0.318 0.135 0.000
Gapped
Lambda K
H
0.270 0.0470 0.000
Matrix:
BLOSUM62
Gap
Penalties: Existence: 11, Extension: 1
Number
of Hits to DB: 1721445992
Number
of Sequences: 576719
Number
of extensions: 40379397
Number
of successful extensions: 108330
Number
of sequences better than 1.0e-04: 101
Number
of HSP's better than 0.0 without
gapping: 90
Number
of HSP's successfully gapped in prelim test: 3
Number
of HSP's that attempted gapping in prelim test: 106822
Number
of HSP's gapped (non-prelim): 1303
length
of query: 1647
length
of database: 181,542,687
effective
HSP length: 59
effective
length of query: 1588
effective
length of database: 147,516,266
effective
search space: 234255830408
effective
search space used: 234255830408
frameshift
window, decay const: 50,
0.1
T:
12
A:
40
X1:
16 ( 7.3 bits)
X2:
38 (14.8 bits)
X3:
64 (24.9 bits)
S1:
41 (21.7 bits)
S2:
120 (51.2 bits)