Query= gnl|UG|Hs#S1367581 Homo sapiens mRNA for KIAA0831 protein,

complete cds /cds=(576,1715) /gb=AB020638 /gi=4240150 /ug=Hs.103000

/len=4943

         (4943 letters)

 

Database: nr

           576,719 sequences; 181,542,687 total letters

 

Searchingdone

 

                                                                   Score     E

Sequences producing significant alignments:                        (bits)  Value

 

ref|NP_055739.1|| KIAA0831 protein >gi|4240151|dbj|BAA74854.1| (...   675  0.0

sp|P39194|ALU7_HUMAN ALU SUBFAMILY SQ SEQUENCE CONTAMINATION WAR...   116  1e-033

gb|AAF56856.1| (AE003768) CG11877 gene product [Drosophila melan...   140  1e-031

sp|P39193|ALU6_HUMAN ALU SUBFAMILY SP SEQUENCE CONTAMINATION WAR...   108  9e-031

sp|P39188|ALU1_HUMAN ALU SUBFAMILY J SEQUENCE CONTAMINATION WARN...   109  2e-025

sp|P39192|ALU5_HUMAN ALU SUBFAMILY SC SEQUENCE CONTAMINATION WAR...    99  2e-021

sp|P39189|ALU2_HUMAN ALU SUBFAMILY SB SEQUENCE CONTAMINATION WAR...   106  2e-021

sp|P39190|ALU3_HUMAN ALU SUBFAMILY SB1 SEQUENCE CONTAMINATION WA...   106  2e-021

ref|NP_060265.1|| hypothetical protein FLJ20378 >gi|7020440|dbj|...    83  2e-021

sp|P39195|ALU8_HUMAN ALU SUBFAMILY SX SEQUENCE CONTAMINATION WAR...    92  3e-021

 

>ref|NP_055739.1|| KIAA0831 protein >gi|4240151|dbj|BAA74854.1| (AB020638) KIAA0831

            protein [Homo sapiens]

            Length = 379

           

 Score =  675 bits (1723), Expect = 0.0

 Identities = 330/379 (87%), Positives = 330/379 (87%)

 Frame = +1

 

Query: 577  MSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLG 756

            MSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLG

Sbjct: 1    MSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLG 60

 

Query: 757  DLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPAXXXXXXXXXXXXXX 936

            DLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPA             

Sbjct: 61   DLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSST 120

 

Query: 937  XXKLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPD 1116

              KLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPD

Sbjct: 121  VSKLAEARRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPD 180

 

Query: 1117 MEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNA 1296

            MEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNA

Sbjct: 181  MEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNA 240

 

Query: 1297 NILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVA 1476

            NILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVA

Sbjct: 241  NILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVA 300

 

Query: 1477 GESDESGDERVSDEETDLGTDWENLPSPRFCDIPXXXXXXXXXXXXXXXXXXXXXXXXXX 1656

            GESDESGDERVSDEETDLGTDWENLPSPRFCDIP                         

Sbjct: 301  GESDESGDERVSDEETDLGTDWENLPSPRFCDIPSQSVEVSQSQSTQASPPIASSSAGGM 360

 

Query: 1657 XXXXXXXVTSWFKAYTGHR 1713

                   VTSWFKAYTGHR

Sbjct: 361  ISSAAASVTSWFKAYTGHR 379

 

 

>sp|P39194|ALU7_HUMAN ALU SUBFAMILY SQ SEQUENCE CONTAMINATION WARNING ENTRY

            Length = 593

           

 Score =  116 bits (287), Expect(2) = 1e-033

 Identities = 54/69 (78%), Positives = 57/69 (82%)

 Frame = +2

 

Query: 2819 RARWLTPVIPALWEAEAGGSLEVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREA 2998

            RARWLTPVIPALWEAEAGGS EVRS R AW TW NPVS ++ +  R WWR PVIPATREA

Sbjct: 2    RARWLTPVIPALWEAEAGGSPEVRSSRPAWPTWXNPVSTKNTKISRAWWRAPVIPATREA 61

 

Query: 2999 AAGESLEPG 3025

             AGESLEPG

Sbjct: 62   EAGESLEPG 70

 

 

 Score = 90.5 bits (221), Expect(2) = 2e-022

 Identities = 41/60 (68%), Positives = 44/60 (73%)

 Frame = -2

 

Query: 2983 WDYRRAPPHPVIFCTSSRNRVSPC*PGCSQTPDLK*SACLGLPKCRDYRREPPRPAGKFF 2804

            WDYRR PP P  FC  SR+ VSPC PG S+TPDL+ S  LGLPKC DYRREPPRPA   F

Sbjct: 340  WDYRRPPPRPANFCIFSRDGVSPCWPGWSRTPDLRXSTRLGLPKCWDYRREPPRPAXXXF 399

 

 

 Score = 82.3 bits (200), Expect(2) = 2e-027

 Identities = 40/62 (64%), Positives = 41/62 (65%)

 Frame = +1

 

Query: 3583 FFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVET 3762

            FFL       AQAGV WR L SLQPP PGF+RF  LSLPSSWDYR  P  PANFCI   

Sbjct: 299  FFLRRSFALVAQAGVQWRDLGSLQPPPPGFKRFSCLSLPSSWDYRRPPPRPANFCIFSRD 358

 

Query: 3763 GV 3768

            GV

Sbjct: 359  GV 360

 

 

 Score = 81.5 bits (198), Expect(2) = 1e-018

 Identities = 50/97 (51%), Positives = 57/97 (58%), Gaps = 3/97 (3%)

 Frame = +1

 

Query: 2731 CSEMQRRSLRLMLLCSVLGKAQYKERISQ---PGAVAHACNPXXXXXXXXXXXXXQEFES 2901

            CSE + R       C+     + K R+ +   PGAVAHACNP             QEFE+

Sbjct: 174  CSEPRSRH------CTPAWATRAKLRLKKXXXPGAVAHACNPSTLGGRGGWITXGQEFET 227

 

Query: 2902 SLANMVKPCFC*KCRKLPGVVAHACNPSYSGGCGGRIA*T 3021

            SLANMVKP    K +  PGVVA ACNPSYSGG G RIA T

Sbjct: 228  SLANMVKPRLYXKYKNXPGVVAGACNPSYSGGXGRRIAXT 267

 

 

 Score = 76.5 bits (185), Expect(2) = 6e-021

 Identities = 45/68 (66%), Positives = 49/68 (71%)

 Frame = -1

 

Query: 3020 VQAIXXXXXXXXXXXQACATTPGNFLHF*QKQGFTMLARLLSNS*PQVIRLPRPPKVPGL 2841

            VQAI           QA ATTPG FL+F  ++GFTMLARL+SNS PQVI  PRPPKV GL

Sbjct: 526  VQAILLPQPPEXLGLQAPATTPGXFLYFXXRRGFTMLARLVSNSXPQVIHPPRPPKVLGL 585

 

Query: 2840 QA*ATAPG 2817

            QA ATAPG

Sbjct: 586  QAXATAPG 593

 

 

 Score = 76.1 bits (184), Expect(2) = 1e-021

 Identities = 39/71 (54%), Positives = 50/71 (69%)

 Frame = +3

 

Query: 2745 AQILTADATLLCSGESTI*RKNFPAGRGGSRL*SRHFGRPRQADHLRSGV*EQPG*HGET 2924

            A+I    ++L    E+   +K   AGRGGSRL S+HFGRPR+ DHLRSGV +QPG HGET

Sbjct: 77   AEIAPLHSSLGNKSETPSQKKXXXAGRGGSRLXSQHFGRPRRVDHLRSGVRDQPGQHGET 136

 

Query: 2925 LFLLEVQKITG 2957

              LL++QK+ G

Sbjct: 137  PSLLKIQKLAG 147

 

 

 Score = 72.6 bits (175), Expect(2) = 6e-019

 Identities = 37/53 (69%), Positives = 38/53 (70%)

 Frame = +2

 

Query: 3611 LPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGF 3769

            LPRLEC GAISA CN  L GS DS  SASRVAGI G  HHA+LIFVF    GF

Sbjct: 408  LPRLECSGAISAHCNLRLPGSSDSPASASRVAGITGARHHARLIFVFLVETGF 460

 

 

 Score = 71.8 bits (173), Expect(2) = 2e-021

 Identities = 40/69 (57%), Positives = 41/69 (58%), Gaps = 3/69 (4%)

 Frame = -3

 

Query: 2991 RVAGITGVRHHTR*FSALLAETGFHHVSQAALKLLTXXXXXXXXXXXAGITGVSHRARLG 2812

            RVAGITG RHH R     L ETGFHHV QA L+LLT           AGITGVSHRAR 

Sbjct: 437  RVAGITGARHHARLIFVFLVETGFHHVGQAGLELLTSGDPPASASQSAGITGVSHRARXX 496

 

Query: 2811 NSF---FILCFP 2785

              F   F  C P

Sbjct: 497  XFFETEFRSCCP 508

 

 

 Score = 67.5 bits (162), Expect(2) = 9e-023

 Identities = 37/62 (59%), Positives = 43/62 (68%)

 Frame = -3

 

Query: 3768 NPRLYQNTKISWA*WQVPIIPATREAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQ 3589

            NP   +NTKIS A W+ P+IPATREAE  ES EP R  LQ AE+AP HSSLG+ +    Q

Sbjct: 36   NPVSTKNTKISRAWWRAPVIPATREAEAGESLEPGRRRLQXAEIAPLHSSLGNKSETPSQ 95

 

Query: 3588 KK 3583

            KK

Sbjct: 96   KK 97

 

 

 Score = 65.2 bits (156), Expect(2) = 2e-027

 Identities = 33/61 (54%), Positives = 37/61 (60%)

 Frame = +2

 

Query: 3743 FVFW*RRGFSPCWPGWS*TPGFG*SACLGLLGCWDCRPEPPRPAPYGFFYTAGISVLSAQ 3922

            F  + R G SPCWPGWS TP    S  LGL  CWD R EPPRPA   FF   G+S+L  +

Sbjct: 352  FCIFSRDGVSPCWPGWSRTPDLRXSTRLGLPKCWDYRREPPRPAXXXFF-XDGVSLLLPR 410

 

Query: 3923 L 3925

            L

Sbjct: 411  L 411

 

 

 Score = 64.4 bits (154), Expect(2) = 9e-023

 Identities = 30/44 (68%), Positives = 31/44 (70%)

 Frame = -2

 

Query: 3874 GRARWLRPAIPAP*EAKASGSPEARSSRPAWPTW*KPPSLPKYK 3743

            GRARWL P IPA  EA+A GSPE RSSRPAWPTW  P S    K

Sbjct: 1    GRARWLTPVIPALWEAEAGGSPEVRSSRPAWPTWXNPVSTKNTK 44

 

 

 Score = 64.0 bits (153), Expect = 1e-008

 Identities = 36/62 (58%), Positives = 37/62 (59%)

 Frame = +3

 

Query: 3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG 3764

            FF       CPGWS VA S L AT+ S VQAIL  QPPE LGL APA  P  FLYF   

Sbjct: 498  FFETEFRSCCPGWSAVARSRLTATSASRVQAILLPQPPEXLGLQAPATTPGXFLYFXXRR 557

 

Query: 3765 GF 3770

            GF

Sbjct: 558  GF 559

 

 

 Score = 62.5 bits (149), Expect = 4e-008

 Identities = 45/96 (46%), Positives = 51/96 (52%), Gaps = 1/96 (1%)

 Frame = -1

 

Query: 3872 PGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVKTPVSTKIQKLAG-HDGRCL*SQXXX 3696

            PGAVA ACNPSTLGG+G  IT  QEF+TSLANMVK  +  K +   G   G C  S   

Sbjct: 200  PGAVAHACNPSTLGGRGGWITXGQEFETSLANMVKPRLYXKYKNXPGVVAGACNPSYSGG 259

 

Query: 3695 XXXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVSKK 3585

                       +   S  R     P    ER+SVSKK

Sbjct: 260  XGRRIAXTREAEVAVSRDRATALQPG-QQERNSVSKK 295

 

 

 Score = 62.1 bits (148), Expect = 5e-008

 Identities = 32/59 (54%), Positives = 40/59 (67%)

 Frame = -3

 

Query: 3912 KTEIPAV*KNP*GAGRGGSGLQSQHPRRPRQADHPKPGVQDQPGQHGENPRLYQNTKIS 3736

            K+E P+  K    AGRGGS L SQH  RPR+ DH + GV+DQPGQHGE P L +  K++

Sbjct: 89   KSETPSQ-KKXXXAGRGGSRLXSQHFGRPRRVDHLRSGVRDQPGQHGETPSLLKIQKLA 146

 

 

 Score = 55.4 bits (131), Expect(2) = 2e-021

 Identities = 25/35 (71%), Positives = 26/35 (73%)

 Frame = -1

 

Query: 3125 PAEGNSFFF*DGASLLLPRLECNGTISAHCNLRLP 3021

            P      FF DG SLLLPRLEC+G ISAHCNLRLP

Sbjct: 392  PRPAXXXFFXDGVSLLLPRLECSGAISAHCNLRLP 426

 

 

 Score = 52.7 bits (124), Expect = 4e-005

 Identities = 33/67 (49%), Positives = 35/67 (51%)

 Frame = -1

 

Query: 3770 KTPVSTKIQKLAGHDGRCL*SQXXXXXXXXXXXNPGDGGCSERRWRHHTPAWAAERDSVS 3591

            +TP   KIQKLAG  G  L SQ           NPG GGCSE R RH TPAWA  R  +

Sbjct: 135  ETPSLLKIQKLAGRGGGRLXSQLLGRLRQENRLNPGGGGCSEPRSRHCTPAWAT-RAKLR 193

 

Query: 3590 KKKKDHP 3570

             KK   P

Sbjct: 194  LKKXXXP 200

 

 

 Score = 52.3 bits (123), Expect(2) = 1e-033

 Identities = 26/35 (74%), Positives = 26/35 (74%)

 Frame = +1

 

Query: 3022 GRRRLQ*AEIVPLHSSLGNKSEAPSQKKKEFPSAG 3126

            GRRRLQ AEI PLHSSLGNKSE PSQKK      G

Sbjct: 70   GRRRLQXAEIAPLHSSLGNKSETPSQKKXXXAGRG 104

 

 

 Score = 51.9 bits (122), Expect = 6e-005

 Identities = 41/106 (38%), Positives = 49/106 (45%), Gaps = 3/106 (2%)

 Frame = +1

 

Query: 3556 GFSRCGWSFFFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPS-- 3729

            G S       F ETE RS       W  +   +  +    R   + LP   +   L + 

Sbjct: 488  GVSHRARXXXFFETEFRSCCPG---WSAVARSRLTATSASRVQAILLPQPPEXLGLQAPA 544

 

Query: 3730 -CPANFCILVETGVFTMLARLVLNSWLRVIRLPWPPRVLGLQA*ATAPG 3873

              P  F        FTMLARLV NS  +VI  P PP+VLGLQA ATAPG

Sbjct: 545  TTPGXFLYFXXRRGFTMLARLVSNSXPQVIHPPRPPKVLGLQAXATAPG 593

 

 

 Score = 51.9 bits (122), Expect(2) = 1e-021

 Identities = 21/24 (87%), Positives = 21/24 (87%)

 Frame = +2

 

Query: 3014 LEPGGGGCSEPRLCHCTPAWATRA 3085

            L PGGGGCSEPR  HCTPAWATRA

Sbjct: 167  LNPGGGGCSEPRSRHCTPAWATRA 190

 

 

 Score = 49.2 bits (115), Expect(2) = 6e-021

 Identities = 21/24 (87%), Positives = 23/24 (95%)

 Frame = -2

 

Query: 3103 FFETEPRSCCPGWSAMAQSRLTAT 3032

            FFETE RSCCPGWSA+A+SRLTAT

Sbjct: 498  FFETEFRSCCPGWSAVARSRLTAT 521

 

 

 Score = 46.5 bits (108), Expect(2) = 6e-019

 Identities = 21/36 (58%), Positives = 21/36 (58%)

 Frame = +3

 

Query: 3765 GFHHVGQAGLELLASGDPXXXXXXXXXXXXXXHRAR 3872

            GFHHVGQAGLELL SGDP              HRAR

Sbjct: 459  GFHHVGQAGLELLTSGDPPASASQSAGITGVSHRAR 494

 

 

 Score = 40.2 bits (92), Expect(2) = 2e-022

 Identities = 18/21 (85%), Positives = 19/21 (89%)

 Frame = -3

 

Query: 3105 FFLRRSLALVAQAGVQWHNLG 3043

            FFLRRS ALVAQAGVQW +LG

Sbjct: 299  FFLRRSFALVAQAGVQWRDLG 319

 

 

 Score = 36.4 bits (82), Expect(2) = 1e-018

 Identities = 18/20 (90%), Positives = 18/20 (90%)

 Frame = +3

 

Query: 3027 AEVAVSRDCAIALQPGQQER 3086

            AEVAVSRD A ALQPGQQER

Sbjct: 270  AEVAVSRDRATALQPGQQER 289

 

 

>gb|AAF56856.1| (AE003768) CG11877 gene product [Drosophila melanogaster]

            Length = 503

           

 Score =  140 bits (349), Expect = 1e-031

 Identities = 95/328 (28%), Positives = 159/328 (47%), Gaps = 7/328 (2%)

 Frame = +1

 

Query: 574  IMSCKMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKL 753

            I + + ++E L+Q I    + +    E   + +  N +      ++ +K + ++ +   

Sbjct: 141  IKAKRKQLELLQQLISGTGQRLRVLGERRDELRRANAEKRKNLPKYPDKVKMLENYVLDR 200

 

Query: 754  GDLVEKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPAXXXXXXXXXXXXX 933

             + +EK         + +    R  I +L + +FPI EV   +++              

Sbjct: 201  VEKIEKLRETHLGLLDSIKQAARRSIQQLVTYVFPIAEVV--LKEEQQRRASVERTEEAE 258

 

Query: 934  XXXKLAEARRTTYLSGRWVCDDHN-GDTSISITGPWISLPNNGDYSAYYSWVEEKK---- 1098

                LA+A+ T+Y+ G+WV       +    I GP  SLP NGDY+AY  W+ + K   

Sbjct: 259  TIAALADAKNTSYIRGKWVFHGSGISEVQYRIVGP--SLPANGDYTAYLDWLADNKDDVP 316

 

Query: 1099 -TTQGPDMEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTR 1275

              T          AY I  AL Y  QL  +LS  L+V LP K+   +FC + L++++F R

Sbjct: 317  KATANEITPSRFEAYRIVGALTYTAQLTQLLSFYLNVRLPHKIAYGDFCRKLLNEEQFRR 376

 

Query: 1276 AVKKLNANILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEV-RADLEESM 1452

             + +LN+NI+YL ++Q V L  L   HTL NL+ ++      LGR G  +V  A L +S+

Sbjct: 377  KISRLNSNIMYLAYTQQVKLRALIEQHTLENLLAILDLERSDLGRYGHLDVNNAPLMKSV 436

 

Query: 1453 EFVDPGVAGESDESGDERVSDEETDLGTDWENLPS 1557

            + +  G+     E+  E  S++E  L  DWE +PS

Sbjct: 437  DSLLIGI-----ETATESESEDENSLRMDWEAVPS 466

 

 

>sp|P39193|ALU6_HUMAN ALU SUBFAMILY SP SEQUENCE CONTAMINATION WARNING ENTRY

            Length = 593

           

 Score =  108 bits (266), Expect(2) = 9e-031

 Identities = 52/69 (75%), Positives = 55/69 (79%)

 Frame = +2

 

Query: 2819 RARWLTPVIPALWEAEAGGSLEVRSLRAAWLTW*NPVSARSAENYRVWWRTPVIPATREA 2998

            RARWLTPVIPALWEAEAGGS EV S R A  TW NPVS ++ +  R WWR PVIPATREA

Sbjct: 2    RARWLTPVIPALWEAEAGGSPEVGSSRPAXPTWRNPVSTKNTKISRAWWRMPVIPATREA 61

 

Query: 2999 AAGESLEPG 3025

             AGESLEPG

Sbjct: 62   EAGESLEPG 70

 

 

 Score = 88.9 bits (217), Expect(2) = 6e-022

 Identities = 41/60 (68%), Positives = 44/60 (73%)

 Frame = -2

 

Query: 2983 WDYRRAPPHPVIFCTSSRNRVSPC*PGCSQTPDLK*SACLGLPKCRDYRREPPRPAGKFF 2804

            WDYR APP P  FC  SR+ VSPC  G S+TPDL+ SA LGLPKC DYRREPPRPA   F

Sbjct: 340  WDYRHAPPRPANFCIFSRDGVSPCWSGWSRTPDLRXSARLGLPKCWDYRREPPRPAXXXF 399

 

 

 Score = 83.5 bits (203), Expect(2) = 3e-027

 Identities = 40/62 (64%), Positives = 41/62 (65%)

 Frame = +1

 

Query: 3583 FFLETESRSAAQAGVWWRHLRSLQPPSPGFRRFFRLSLPSSWDYRHLPSCPANFCILVET 3762

            FFL       AQAGV WR L S QPP PGF+RF  LSLPSSWDYRH P  PANFCI   

Sbjct: 299  FFLRRSFALVAQAGVQWRDLGSPQPPPPGFKRFSCLSLPSSWDYRHAPPRPANFCIFSRD 358

 

Query: 3763 GV 3768

            GV

Sbjct: 359  GV 360

 

 

 Score = 80.0 bits (194), Expect(2) = 1e-018

 Identities = 41/73 (56%), Positives = 46/73 (62%)

 Frame = +1

 

Query: 2803 ERISQPGAVAHACNPXXXXXXXXXXXXXQEFESSLANMVKPCFC*KCRKLPGVVAHACNP 2982

            ++   PGAVAHACNP             +EFE+SL NM KP    K +  PGVVAHACNP

Sbjct: 195  KKXXXPGAVAHACNPSTLGGRGGRITXGREFETSLTNMEKPRLYXKYKNXPGVVAHACNP 254

 

Query: 2983 SYSGGCGGRIA*T 3021

            SYSGG G RIA T

Sbjct: 255  SYSGGXGRRIAXT 267

 

 

 Score = 80.0 bits (194), Expect(2) = 2e-022

 Identities = 45/68 (66%), Positives = 50/68 (73%)

 Frame = -1

 

Query: 3020 VQAIXXXXXXXXXXXQACATTPGNFLHF*QKQGFTMLARLLSNS*PQVIRLPRPPKVPGL 2841

            VQAI           QACATTPG FL+F  ++GF+ML RL+SNS PQVIR PRPPKV GL

Sbjct: 526  VQAILLPQPPEXLGLQACATTPGXFLYFXXRRGFSMLVRLVSNSRPQVIRPPRPPKVLGL 585

 

Query: 2840 QA*ATAPG 2817

            QA ATAPG

Sbjct: 586  QAXATAPG 593

 

 

 Score = 74.9 bits (181), Expect(2) = 8e-021

 Identities = 39/71 (54%), Positives = 50/71 (69%)

 Frame = +3

 

Query: 2745 AQILTADATLLCSGESTI*RKNFPAGRGGSRL*SRHFGRPRQADHLRSGV*EQPG*HGET 2924

            A+I    ++L    E+   +K   AGRGGSRL S+HFGRPR+ADHLRSGV +QP  HGET

Sbjct: 77   AEIAPLHSSLGNKSETPSQKKXXXAGRGGSRLXSQHFGRPRRADHLRSGVRDQPDQHGET 136

 

Query: 2925 LFLLEVQKITG 2957

              LL++QK+ G

Sbjct: 137  PSLLKIQKLAG 147

 

 

 Score = 67.5 bits (162), Expect(2) = 2e-015

 Identities = 36/53 (67%), Positives = 37/53 (68%)

 Frame = +2

 

Query: 3611 LPRLECGGAISARCNHHLLGSGDSSVSASRVAGIIGTCHHAQLIFVFW*RRGF 3769

            LPRLEC GAISA  N  L GS DS  SASRVAGI G  HHA+LIFVF    GF

Sbjct: 408  LPRLECNGAISAHRNLRLPGSSDSPASASRVAGITGMRHHARLIFVFLVETGF 460

 

 

 Score = 66.3 bits (159), Expect(2) = 4e-020

 Identities = 36/62 (58%), Positives = 44/62 (70%)

 Frame = -3

 

Query: 3768 NPRLYQNTKISWA*WQVPIIPATREAETEESPEPRRWWLQRAEMAPPHSSLGS*ARLRLQ 3589

            NP   +NTKIS A W++P+IPATREAE  ES EP R  L+ AE+AP HSSLG+ +    Q

Sbjct: 36   NPVSTKNTKISRAWWRMPVIPATREAEAGESLEPGRRRLRXAEIAPLHSSLGNKSETPSQ 95

 

Query: 3588 KK 3583

            KK

Sbjct: 96   KK 97

 

 

 Score = 65.2 bits (156), Expect(2) = 1e-018

 Identities = 38/69 (55%), Positives = 40/69 (57%), Gaps = 3/69 (4%)

 Frame = -3

 

Query: 2991 RVAGITGVRHHTR*FSALLAETGFHHVSQAALKLLTXXXXXXXXXXXAGITGVSHRARLG 2812

            RVAGITG+RHH R     L ETGF HV QA L+L T           AGITGVSHRAR 

Sbjct: 437  RVAGITGMRHHARLIFVFLVETGFLHVGQAGLELPTSGDPPASASQSAGITGVSHRARXX 496

 

Query: 2811 NSF---FILCFP 2785

              F   F  C P

Sbjct: 497  XFFETEFRSCCP 508

 

 

 Score = 63.6 bits (152), Expect(2) = 3e-027

 Identities = 33/61 (54%), Positives = 37/61 (60%)

 Frame = +2

 

Query: 3743 FVFW*RRGFSPCWPGWS*TPGFG*SACLGLLGCWDCRPEPPRPAPYGFFYTAGISVLSAQ 3922

            F  + R G SPCW GWS TP    SA LGL  CWD R EPPRPA   FF   G+S+L  +

Sbjct: 352  FCIFSRDGVSPCWSGWSRTPDLRXSARLGLPKCWDYRREPPRPAXXXFF-XDGVSLLLPR 410

 

Query: 3923 L 3925

            L

Sbjct: 411  L 411

 

 

 Score = 60.9 bits (145), Expect = 1e-007

 Identities = 32/59 (54%), Positives = 40/59 (67%)

 Frame = -3

 

Query: 3912 KTEIPAV*KNP*GAGRGGSGLQSQHPRRPRQADHPKPGVQDQPGQHGENPRLYQNTKIS 3736

            K+E P+  K    AGRGGS L SQH  RPR+ADH + GV+DQP QHGE P L +  K++

Sbjct: 89   KSETPSQ-KKXXXAGRGGSRLXSQHFGRPRRADHLRSGVRDQPDQHGETPSLLKIQKLA 146

 

 

 Score = 60.5 bits (144), Expect = 2e-007

 Identities = 32/72 (44%), Positives = 40/72 (55%)

 Frame = -1

 

Query: 3947 GSPAINHEAEHLKQRSQQCRRTHKGPGAVAQACNPSTLGGQGKRITRSQEFKTSLANMVK 3768

            G P   H       R++   +    PGAVA ACNPSTLGG+G RIT  +EF+TSL NM K

Sbjct: 175  GEPRSRHCTPAWATRAKLRLKKXXXPGAVAHACNPSTLGGRGGRITXGREFETSLTNMEK 234

 

Query: 3767 TPVSTKIQKLAG 3732

              +  K +   G

Sbjct: 235  PRLYXKYKNXPG 246

 

 

 Score = 58.9 bits (140), Expect = 5e-007

 Identities = 34/62 (54%), Positives = 36/62 (57%)

 Frame = +3

 

Query: 3585 FFGDGVSLSCPGWSVVAPSPLAATTISWVQAILPSQPPE*LGL*APAIMPS*FLYFGRDG 3764

            FF       CPGWS +A S L AT+ S VQAIL  QPPE LGL A A  P  FLYF   

Sbjct: 498  FFETEFRSCCPGWSAMARSRLTATSASRVQAILLPQPPEXLGLQACATTPGXFLYFXXRR 557

 

Query: 3765 GF 3770

            GF

Sbjct: 558  GF 559

 

 

 Score = 56.6 bits (134), Expect(2) = 4e-020