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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|XP_045776 - hypothetical protein [Homo sapiens] Length 200 (1 .. 200)
Sequence 2 lcl|T10C6.5 CE16380 (HINXTON) Length 230 (1 .. 230)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score = 85.9 bits (211), Expect = 1e-16
Identities = 47/100 (47%), Positives = 59/100 (59%), Gaps = 3/100 (3%)





Query: 1   MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVXXXXXX 60
           MTTA RPTF PARGG  +GEGDLS+LS QYSS+D+PSHTK+KYRQT Q+   ++      
Sbjct: 1   MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYRQTGQETEADLRKKDLR 60

Query: 61  XXXXXXXXXXXXXXXXXXPTREHTTSSSVSKKPRLDQIPA 100
                                  ++SSS SK+ R+DQI A
Sbjct: 61  RELEDKERNAIREKRARDSA---SSSSSHSKRQRMDQIAA 97
CPU time:     0.06 user secs.	    0.01 sys. secs	    0.07 total secs.

Gapped
Lambda     K      H
   0.308    0.124    0.339 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 240
Number of Sequences: 0
Number of extensions: 13
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 200
length of database: 233,319,389
effective HSP length: 111
effective length of query: 89
effective length of database: 103,827,233
effective search space: 9240623737
effective search space used: 9240623737
T: 9
A: 40
X1: 16 ( 7.1 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)