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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_115675 - hypothetical protein MGC2714 [Homo sapiens] Length 237 (1 .. 237)
Sequence 2 lcl|H38K22.2A CE23836 (HINXTON) Length 336 (1 .. 336)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  112 bits (281), Expect = 2e-24
Identities = 64/202 (31%), Positives = 109/202 (53%), Gaps = 26/202 (12%)





Query: 55  FYEYAGPDEVVG-----PEGMEKFCEDIGVEPENIIMLVLAWKLEAESMGFFTKEEWLKG 109
           F +Y  P + VG     P G+ +   D+G E  +  +LVLAWK  A++   F+ +EW+KG
Sbjct: 69  FNQYVDPKDKVGEKRMGPHGINRLLTDLGYEATDRRVLVLAWKFTAQTQCEFSLDEWVKG 128

Query: 110 MTSLQCDCTEKLQNKFDFLRSQL-NDISSFKNIYRYAFDFARDKDQRSLDIDTAKSMLAL 168
           MT+LQ D  + L+ + D + S L +D + F  +Y +AF++A+    R+LD++TA     +
Sbjct: 129 MTALQADTVQNLRQRIDSINSGLESDKAKFHELYLFAFNYAKSAACRNLDLETAICCWDV 188

Query: 169 LLGRTWPLFSVFYQYL--------------------EQSKYRVMNKDQWYNVLEFSRTVH 208
           L G+   + + +  +L                    +Q K   +++D W    +F     
Sbjct: 189 LFGQRSTIMTQWIDFLWAQENAAASRLAQNVGASNAKQFKSVWISRDTWNLFWDFILLSK 248

Query: 209 ADLSNYDEDGAWPVLLDEFVEW 230
            DLS+YD++GAWPVL+D+FV++
Sbjct: 249 PDLSDYDDEGAWPVLIDQFVDY 270
CPU time:     0.06 user secs.	    0.02 sys. secs	    0.08 total secs.

Gapped
Lambda     K      H
   0.319    0.135    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 597
Number of Sequences: 0
Number of extensions: 52
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 237
length of database: 233,319,389
effective HSP length: 114
effective length of query: 123
effective length of database: 121,089,923
effective search space: 14894060529
effective search space used: 14894060529
T: 9
A: 40
X1: 16 ( 7.4 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)