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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_055576 - KIAA0174 gene product [Homo sapiens] Length 364 (1 .. 364)
Sequence 2 lcl|K10C8.3 CE06169 Human KIIAA0174 protein like (HINXTON) Length 432 (1 .. 432)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  190 bits (483), Expect = 2e-47
Identities = 95/157 (60%), Positives = 119/157 (75%), Gaps = 3/157 (1%)





Query: 33  AQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKEL 92
           A KAR EIADY+AA K +RARIRVEHIIREDY+VEA EILE+YCDLLLARFGLI+ MK L
Sbjct: 34  AMKARTEIADYIAANKPDRARIRVEHIIREDYVVEAFEILEMYCDLLLARFGLIEQMKTL 93

Query: 93  DSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQI---GTVNDRLM 149
           D G+AE+V +++WAAPRL +++AE K ++DQL  KY K + +  R NQ+     VN +++
Sbjct: 94  DDGIAEAVISIMWAAPRLATDIAEFKTISDQLTIKYGKPFAEAARANQLEFPARVNPKII 153

Query: 150 HKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAE 186
            KL   APPK+LVERY+IEIA    VP+ PD  VM E
Sbjct: 154 SKLGAAAPPKLLVERYMIEIAAAAGVPFVPDPDVMRE 190
CPU time:     0.11 user secs.	    0.01 sys. secs	    0.12 total secs.

Gapped
Lambda     K      H
   0.315    0.136    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1901
Number of Sequences: 0
Number of extensions: 143
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 364
length of database: 233,319,389
effective HSP length: 121
effective length of query: 243
effective length of database: 155,759,962
effective search space: 37849670766
effective search space used: 37849670766
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)