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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_068753 - hypothetical protein FLJ11773 [Homo sapiens] Length 218 (1 .. 218)
Sequence 2 lcl|Y69A2AR.BB CE26738 (ST.LOUIS) Length 927 (1 .. 927)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score = 70.1 bits (170), Expect = 1e-11
Identities = 31/83 (37%), Positives = 52/83 (62%)





Query: 113 SDECIPWEVWTVKVHVVALATEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQS 172
           +D+   WE W + + V  + +  E Q  R++V + + EK+++I E +N + Y PKMPT++
Sbjct: 241 ADDGTSWEEWKLILDVFRVESIDELQKMRQRVADDIGEKVLDICEHINHNHYTPKMPTKT 300

Query: 173 EVDNVFDTGLRDVQPYLYKISFQ 195
           E+  +F+T   D QPYL+KI  Q
Sbjct: 301 EIPEIFETKFSDCQPYLFKIRRQ 323
CPU time:     0.08 user secs.	    0.04 sys. secs	    0.12 total secs.

Gapped
Lambda     K      H
   0.319    0.135    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1331
Number of Sequences: 0
Number of extensions: 102
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 218
length of database: 233,319,389
effective HSP length: 112
effective length of query: 106
effective length of database: 113,448,925
effective search space: 12025586050
effective search space used: 12025586050
T: 9
A: 40
X1: 16 ( 7.4 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)