NCBI logo

Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_060863 - hypothetical protein FLJ11336 [Homo sapiens] Length 509 (1 .. 509)
Sequence 2 lcl|M05D6.2 CE03500 testis-specific like protein (HINXTON) Length 451 (1 .. 451)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  193 bits (491), Expect = 3e-48
Identities = 129/433 (29%), Positives = 225/433 (51%), Gaps = 13/433 (3%)





Query: 76  MALAHEIVVNGDFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVG 135
           M L HEI ++ +FQI   + P N++++ V+E +HKA+++ L   L++DPP  ++    + 
Sbjct: 1   MELVHEIAIDPNFQIP--DKPTNAIQRCVQESMHKAYYNQLRRDLAKDPPELEYCFSFLM 58

Query: 136 EIKETLLSFLLPG-HTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPA 194
           E+K  +L  +L   HTRL+ +I  +LD   ++ + + G LDI K+ ++I+ +   LC+PA
Sbjct: 59  EVKTMILDDILTAQHTRLKAEINSMLDETALRGKLDQGQLDIKKVMKYIVDLCSRLCSPA 118

Query: 195 RDEEVKKLKDIKEIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEIL 254
           RD +V +L+   +++ +F     +L+LMK D+ N+ IS  R  + + S ++E   FQ+ L
Sbjct: 119 RDVKVAELRTRTDVIDIFEGTMDLLELMKNDLTNYQISQNRAAIEEYSSKHEYDMFQKFL 178

Query: 255 ERQPNSLDFVTQWLEEASEDLMTQKY-KHALPVGGMAAGSGDMPRLSPVAVQNYAYLKLL 313
              PN   F  QWL+ A ++L  +K                +      +   +  Y KL+
Sbjct: 179 IENPNGCYFARQWLKAAYDELFEKKLDAEGEETSVKKERKNEDTDTVLIDTTSRGYTKLI 238

Query: 314 KWDHLQRPFPETVLMDQSRFHXXXXXXXXXTILGAVLLVTFSMAAPGISSQADFAEKLK- 372
           + +     FPET+ +D+ +            +  + + VT ++A   IS  ADF + LK 
Sbjct: 239 QVNEYD-GFPETLKIDKIKIELLAEKFLQIVMCASSVFVTCNVAGKQISESADFKKTLKD 297

Query: 373 -MIVKILLTDMHLPSFHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDKETVLKGQIQAV 431
            +IV    TD       +K  L  IGE+ C++ +   S   +  + T+  T ++ QI A+
Sbjct: 298 HLIVITNNTDEE----RIKSDLEKIGEQ-CVKEAVDTSKKLNIEWNTESSTSIRNQINAL 352

Query: 432 ASPDDPIRRIMESRILTFLETYLASGHQKPLPTVPGGLSPVQRELEEVAIKFARLVNYNK 491
            S D+PIR+++ +R+ TF+E  L S    P   +P GLS +Q EL     KF RL  +N+
Sbjct: 353 ISSDNPIRKLVHTRVSTFVEEMLRSPTSVPHRLLP-GLSVIQSELCAFTSKFLRLCVHNR 411

Query: 492 MVFCPYYDAILSK 504
             F   Y  ++ +
Sbjct: 412 KTFYAMYSNLIQE 424
CPU time:     0.11 user secs.	    0.02 sys. secs	    0.13 total secs.

Gapped
Lambda     K      H
   0.318    0.134    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1650
Number of Sequences: 0
Number of extensions: 162
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 509
length of database: 233,319,389
effective HSP length: 125
effective length of query: 384
effective length of database: 176,021,014
effective search space: 67592069376
effective search space used: 67592069376
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)