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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|BAA74882 - KIAA0859 protein [Homo sapiens] Length 707 (1 .. 707)
Sequence 2 lcl|C01B10.8 CE06739 (ST.LOUIS) Length 656 (1 .. 656)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  288 bits (737), Expect = 2e-76
Identities = 221/692 (31%), Positives = 326/692 (46%), Gaps = 63/692 (9%)





Query: 13  PKSSREFGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNSELSE 72
           P   + F    YW+ FF +R K  FEWYG Y  L  V+ KY+KP++  L +GCGNSEL+ 
Sbjct: 4   PNEPQSFTDPAYWKNFFAKR-KSPFEWYGDYNSLSNVIDKYLKPKDTFLQLGCGNSELAT 62

Query: 73  QLYDVGYRDIVNIDISEVVIKQMKECNATRRPQMSFLKMDMTQMEFPDASFQVVLDKGTL 132
           QLYD G+  I +ID+   VI      N   R  M+F   D   +   D +  +V+DKGTL
Sbjct: 63  QLYDNGFHCIHSIDVEPSVIATQIRKN-KERLGMTFETGDAANLSMADEAHTIVIDKGTL 121

Query: 133 DAVL---TDEEEKTLQQVDRMLAEVGRVLQVGGRYLCISLAQAHILKKAVGHF-SREGWM 188
           DA+L     E ++ L  V +M  EV RVL  GGRY+ ++LAQ HI +  + HF   + ++
Sbjct: 122 DALLPPSASESDEAL--VTKMFEEVHRVLASGGRYIIVTLAQPHITEFWINHFYPLKQYI 179

Query: 189 VRVHQVANSQDQVLEAEPQFSLPVFAFIMTKFRPVPGSALQIFELCAQEQRKPVRLESAE 248
           +RV +V N           F +PVF FI TK R    + L + E+      +  R++S +
Sbjct: 180 LRVQKVENKAS-------GFPMPVFCFIATKMRAPMPNPLPL-EVLRSSSIRTDRIDSTD 231

Query: 249 RLAEAV---QERQQYAWLCSQLRRKARLGSVSLDLCDGDTG-EPRYTLHVVDSPTVKPSR 304
            L +++   QE  Q+ +LCS    K     VS+D    D    PRY + VVD+P  K  +
Sbjct: 232 ELKDSIRGEQELSQFIYLCS----KKLDSEVSIDFHGADPSLGPRYRICVVDNPEAK--K 285

Query: 305 DNHFAIFIIPQGRETEWLFGMDEGRKQLAASAGFRRLITVALHRGQQYE-SMDHIQAELS 363
            + FA F++P GR++EWLF   +GRK L    G  RL  V L+R Q+YE  MD +++++ 
Sbjct: 286 IDTFAAFVVPIGRDSEWLFASPKGRKALRVQCGRERLAIVFLNRNQKYEKGMDGVKSDI- 344

Query: 364 ARVMELAPAGMPTQQQVPFLSVGGDIGVRTVQHQDCSPLSGDYVIEDVQGDDKRYFRRLI 423
              + +             LS+GG + V+       S ++G + +E+V  +  +  RRL+
Sbjct: 345 GHFVGMLDVRQDNTGNYEILSIGG-VDVKRTVSTGRSDINGGWSVEEVTVEGNQ-TRRLV 402

Query: 424 FLSNRNVVQSEARLLKDVSHXXXXXXXXXXXXXXXXXXEDLPAAPGQSIDKSYLCCEHHK 483
           FL+  N+VQSEA L                                  ID   L C+ H+
Sbjct: 403 FLNTMNLVQSEAYLKTGKKKQTV-------------------------IDLDQLACDFHR 437

Query: 484 AMIAGXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXFVHDHFPKSCIDAVEIDPSMLEVAT 542
            MI                                ++  HF K+ + AVE+DP +L++A 
Sbjct: 438 MMIGSLAISPQQPLAKNDAQCKMAVLGLGGGLLTAYLVRHFKKAHVTAVELDPEVLKIAN 497

Query: 543 QWFGFSQSD-RMKVHIADGLDYIASLAGGGEARPCYDVIMFDVDSKDPTLGMSCPPPAFV 601
             F F  SD R+ V I D L ++   A   E    YDVI  DV S      + CPP AF+
Sbjct: 498 SHFSFPHSDARIDVVIQDALIHLQETAKKPEEEK-YDVIFVDV-SGSQNAALQCPPSAFL 555

Query: 602 EQSFLQKVKSILTPEGVFILNLVCRDLGLKDSVLAGLKAVFPLLYVRRIEGEVNEILFCQ 661
               L  +K+ +  +G+  LNLV RD     S+   +   FP LY      +VNEI+   
Sbjct: 556 TPEALGNMKNSVKEQGMISLNLVTRDSEFGKSIKKNIAEYFPTLYTVLSFEDVNEIIIGL 615

Query: 662 LHPEQKLATPELLETAQALERTLRKPGRGWDD 693
             P+  +         Q L  T+RK    +D+
Sbjct: 616 KTPKNTIKP----VVPQKLINTVRKDIGSYDE 643
CPU time:     0.18 user secs.	    0.05 sys. secs	    0.23 total secs.

Gapped
Lambda     K      H
   0.322    0.138    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3080
Number of Sequences: 0
Number of extensions: 266
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 707
length of database: 233,319,389
effective HSP length: 128
effective length of query: 579
effective length of database: 191,077,725
effective search space: 110634002775
effective search space used: 110634002775
T: 9
A: 40
X1: 16 ( 7.4 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)