NCBI logo

Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Aug-1-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_056230 - DKFZP564B167 protein [Homo sapiens] Length 127 (1 .. 127)
Sequence 2 lcl|F53F10.3 CE10984 (ST.LOUIS) Length 145 (1 .. 145)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  104 bits (260), Expect = 3e-23
Identities = 52/105 (49%), Positives = 67/105 (63%)





Query: 23  MLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSAVLMATGFIW 82
           +LP   +P +NH AGP+TVFFWAP +KW L+ AGLAD+ARPA+KLS  Q++ L ATG IW
Sbjct: 22  VLPAFAKPAWNHAAGPKTVFFWAPTIKWTLIGAGLADLARPADKLSLYQNSALFATGAIW 81

Query: 83  SRYSLVIIPKNWSLXXXXXXXXXXXXSQLFRIWRYNQELKAKAHK 127
           +RY LVI P N+ L            +QL RI  Y  E   + H+
Sbjct: 82  TRYCLVITPINYYLSSVNFFVMCTGLAQLCRIAHYRIEETPEFHQ 126
CPU time:     0.04 user secs.	    0.02 sys. secs	    0.06 total secs.

Gapped
Lambda     K      H
   0.325    0.135    0.438 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180
Number of Sequences: 0
Number of extensions: 10
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 127
length of database: 233,319,389
effective HSP length: 103
effective length of query: 24
effective length of database: 44,091,909
effective search space: 1058205816
effective search space used: 1058205816
T: 9
A: 40
X1: 15 ( 7.0 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)