Score = 238 bits (606), Expect = 4e-62
Identities = 123/251 (49%), Positives = 173/251 (68%), Gaps = 6/251 (2%)
Query: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
+I TPTNQ LTNVAVVRMK+ GKRFEIACYKNKVV WR+ EKD+DEVLQTH+VF NVS
Sbjct: 4 NIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFSNVS 63
Query: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQ-----MFRDIATIVA 116
KGQ++KKE+LI+AFG +DQ EI + V + + + ++++ ++A
Sbjct: 64 KGQLSKKEELIAAFGIEDQLEIYSRQRRLASVGKRASGGFRSIAERGSFFLLKNVSQLIA 123
Query: 117 DKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRF 176
VNPETKRP +I++A++++H+S+K N+S+KQQAL+ I +L+E +KIERA M++R
Sbjct: 124 SMVVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRV 183
Query: 177 ILPVNEGXXXXXXXXXXXXVIESEDYGQ-QLEIVCLIDPGCFREIDELIKKETKGKGSLE 235
+P E +E +D+ LE+V LI+PG FR +D+L++ ETKG G LE
Sbjct: 184 AIPTKEAKSVHTKLKTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLE 243
Query: 236 VLNLKDVEEGD 246
+L+LKDV EG+
Sbjct: 244 ILSLKDVVEGE 254
CPU time: 0.06 user secs. 0.03 sys. secs 0.09 total secs.
Gapped
Lambda K H
0.317 0.135 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 602
Number of Sequences: 0
Number of extensions: 45
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 250
length of database: 233,319,389
effective HSP length: 115
effective length of query: 135
effective length of database: 125,992,534
effective search space: 17008992090
effective search space used: 17008992090
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
