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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Jul-12-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|AAH00957 - Unknown (protein for IMAGE:3451448) [Homo sapiens] Length 299 (1 .. 299)
Sequence 2 lcl|AAF53217 - CG12292 gene product [Drosophila melanogaster]. Length 385 (1 .. 385)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  208 bits (529), Expect = 5e-53
Identities = 116/281 (41%), Positives = 156/281 (55%), Gaps = 1/281 (0%)





Query: 1   GLLSMGXXXXXXXXXXXXXXXTLVTPXXXXXXXXXXXXXXYFLNERLNLHGKIGCLLSIL 60
           GLL+MG               +LVTP               FLNE+LNL GKIGC L IL
Sbjct: 97  GLLTMGVGEAANFAAYAFAPASLVTPLGALSVIISAVMASRFLNEKLNLLGKIGCFLCIL 156

Query: 61  GSTVMVIHAPKEEEIETLNEMSHKLGDPGXXXXXXXXXXXXXXXXXXXGPRHGQTNILVY 120
           GST++VIH+PKE+EIE L  +   L DP                     PRHG TN++VY
Sbjct: 157 GSTIIVIHSPKEKEIEDLQLLFDMLLDPVFILYVICIVGSTVFVACFIAPRHGHTNVVVY 216

Query: 121 ITICSVIGAFSVSCVKGLGIAIKE-LFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRAL 179
           I +CS IG+ +V   K LG+AI++ L  G  V    + W L+L  +  ++ Q+NYLN+AL
Sbjct: 217 IFLCSGIGSLTVMSCKALGLAIRQTLNNGGNVFLTWMPWFLILVTVTFIAIQMNYLNKAL 276

Query: 180 DIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLLHAFK 239
           DIFNTSIVTP+YYV FTT V+  SAILFKE+  M  DD++G + GF  +I  +FLL+AF+
Sbjct: 277 DIFNTSIVTPVYYVMFTTLVIAASAILFKEFTHMRFDDILGDVCGFLIVITAVFLLNAFR 336

Query: 240 DVSFSLASLPVSFRKDEKAMNGNLSNMYEVLNNNEESLTCG 280
           D+  SL  +    R   + ++     +    N  E  L+ G
Sbjct: 337 DIDISLNDVRGLMRPKMQRVSQFDEEVLVTSNTKERRLSYG 377
CPU time:     0.06 user secs.	    0.02 sys. secs	    0.08 total secs.

Gapped
Lambda     K      H
   0.323    0.140    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 856
Number of Sequences: 0
Number of extensions: 69
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 299
length of database: 232,970,811
effective HSP length: 118
effective length of query: 181
effective length of database: 141,029,223
effective search space: 25526289363
effective search space used: 25526289363
T: 9
A: 40
X1: 16 ( 7.5 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.9 bits)
S2: 70 (31.6 bits)