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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Jul-12-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_055739 - KIAA0831 protein [Homo sapiens] Length 379 (1 .. 379)
Sequence 2 lcl|AAF56856 : CG11877 gene product [Drosophila melanogaster]. Length 503 (1 .. 503)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  138 bits (348), Expect = 7e-32
Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 16/331 (4%)





Query: 4   KMRIEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLV 63
           + ++E L+Q I    + +    E   + +  N +      ++ +K + ++ +     + +
Sbjct: 145 RKQLELLQQLISGTGQRLRVLGERRDELRRANAEKRKNLPKYPDKVKMLENYVLDRVEKI 204

Query: 64  EKKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPAXXXXXXXXXXXXXXXXK 123
           EK         + +    R  I +L + +FPI EV   +++                   
Sbjct: 205 EKLRETHLGLLDSIKQAARRSIQQLVTYVFPIAEVV--LKEEQQRRASVERTEEAETIAA 262

Query: 124 LAEARRTTYLSGRWVCDDHN-GDTSISITGPWISLPNNGDYSAYYSWVEEKK-----TTQ 177
           LA+A+ T+Y+ G+WV       +    I GP  SLP NGDY+AY  W+ + K      T 
Sbjct: 263 LADAKNTSYIRGKWVFHGSGISEVQYRIVGP--SLPANGDYTAYLDWLADNKDDVPKATA 320

Query: 178 GPDMEQSNPAYTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKK 237
                    AY I  AL Y  QL  +LS  L+V LP K+   +FC + L++++F R + +
Sbjct: 321 NEITPSRFEAYRIVGALTYTAQLTQLLSFYLNVRLPHKIAYGDFCRKLLNEEQFRRKISR 380

Query: 238 LNANILYLCFSQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEV-RADLEESMEFVD 296
           LN+NI+YL ++Q V L  L   HTL NL+ ++      LGR G  +V  A L +S++ + 
Sbjct: 381 LNSNIMYLAYTQQVKLRALIEQHTLENLLAILDLERSDLGRYGHLDVNNAPLMKSVDSLL 440

Query: 297 PGVAGESDESGDERVSDEETDLGTDWENLPS 327
            G+     E+  E  S++E  L  DWE +PS
Sbjct: 441 IGI-----ETATESESEDENSLRMDWEAVPS 466
CPU time:     0.09 user secs.	    0.01 sys. secs	    0.10 total secs.

Gapped
Lambda     K      H
   0.315    0.132    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1274
Number of Sequences: 0
Number of extensions: 125
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 379
length of database: 232,970,811
effective HSP length: 121
effective length of query: 258
effective length of database: 158,592,353
effective search space: 40916827074
effective search space used: 40916827074
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)