Score = 144 bits (364), Expect = 2e-33
Identities = 90/228 (39%), Positives = 126/228 (54%), Gaps = 20/228 (8%)
![]()
Query: 5 LNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPEVTHE 64
LN+ +R DL+KFIKF LK+ QV+VQ+RLGEK+ T+ + GSDWFN+A++D PEV E
Sbjct: 6 LNAAER-DLEKFIKFLVLKSTQVVVQSRLGEKMQTQCNPL-AGSDWFNIAVQDHPEVLDE 63
Query: 65 AKKAL---AGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCD------------- 108
K+AL G+ +CVEISLKT+EGD M LE+W L++ + +
Sbjct: 64 TKRALNLKTGESILQRLPLCVEISLKTTEGDQMVLEVWSLDLLQPQNGASPATNDLNPEG 123
Query: 109 KEIKVSYTVYNRXXXXXXXXXAITRVTPAYRLSRKQ-GHEYVILYRIYFGEVQLSGLGEG 167
+ +K ++ +YNR ++TR TPAY+LSR+Q Y I YRIY Q+ LGEG
Sbjct: 124 QTLKAAHAIYNRMGIMLKSLISLTRTTPAYKLSRRQCPDSYGIFYRIYVDRPQVHTLGEG 183
Query: 168 FQXXXXXXXXXXXXXITLSCAYRINLAFMSTRQFERTPPIMGIIIDHF 215
+ + +S AYR L T + IM + DHF
Sbjct: 184 HKHVKIGQLSTIVGSLVMSVAYRTKLTISPTAAQSESNTIM-LKSDHF 230
CPU time: 0.11 user secs. 0.04 sys. secs 0.15 total secs.
Gapped
Lambda K H
0.317 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1841
Number of Sequences: 0
Number of extensions: 141
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 517
length of database: 232,970,811
effective HSP length: 125
effective length of query: 392
effective length of database: 176,643,311
effective search space: 69244177912
effective search space used: 69244177912
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)
