Score = 231 bits (589), Expect = 8e-60
Identities = 162/397 (40%), Positives = 204/397 (50%), Gaps = 81/397 (20%)
Query: 34 QKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLIQSMKELD 93
QK+RKEIADYLA GK ERARIRVEHIIREDYLVEAME++E+YCDLLLARFGLI MKELD
Sbjct: 34 QKSRKEIADYLATGKTERARIRVEHIIREDYLVEAMEMVEMYCDLLLARFGLITQMKELD 93
Query: 94 SGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRT-NQIGTVNDRLMHKL 152
+G+AE V++L+W PRLQS++AELKI++D KY ++ + RT V+++LMHKL
Sbjct: 94 TGIAEPVASLVWVCPRLQSDIAELKIISDIFVTKYGPQFAEQSRTATGEHYVSEKLMHKL 153
Query: 153 SVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAPPGVETDLIDVGFTDDVKKXXXXXX 212
+++APPK+LVE YLI IAKNYN+ YEPD VM E P + LID+ D
Sbjct: 154 TLQAPPKLLVENYLIAIAKNYNIEYEPDPQVMQEDQP-QQPHLIDL---SDRNNLSGGGG 209
Query: 213 XXXXFTAP-----VGGPDGTVXXXXXXXXXSANTPFSYPL--PKGPSDFNGLPMGTY--- 262
AP +G P + + PF+YP G G P G Y
Sbjct: 210 AGGGGAAPPQMGFIGYP--AMPALPDMPMPPSAKPFNYPPFGGGGGGGGGGAPAGAYALP 267
Query: 263 ---QAFP----NIHPPQIPA---------------------------------------- 275
QA P NI P Q P
Sbjct: 268 HPVQAPPPFAYNIPPNQPPTHAVLPAKCAEEKDLNTNFIDREANNTDGSGSPDENILRPK 327
Query: 276 ----TPPSYESVDDINADKNISSAQIVGPGPK---PEASAKLPSRPADNYDNFVLPELPS 328
PP Y S++ + N+ +A P P+ P + LPS P P LP+
Sbjct: 328 PENDPPPRYTSINPV----NLQNANKPKPQPRSKLPPGNPTLPSAP----PALDFPSLPN 379
Query: 329 VPDTLPX--XXXXXXXXXXEDIDFDDLSRRFEELKKK 363
VP+ LP ++IDFDDLSRRFE LKK+
Sbjct: 380 VPNDLPDIPGAGAEKKNDEDEIDFDDLSRRFENLKKR 416
CPU time: 0.10 user secs. 0.01 sys. secs 0.11 total secs.
Gapped
Lambda K H
0.315 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2068
Number of Sequences: 0
Number of extensions: 161
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 364
length of database: 232,970,811
effective HSP length: 121
effective length of query: 243
effective length of database: 155,527,302
effective search space: 37793134386
effective search space used: 37793134386
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)
