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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Jul-12-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_068753 - hypothetical protein FLJ11773 [Homo sapiens] Length 218 (1 .. 218)
Sequence 2 lcl|AAF48887 - CG7053 gene product [Drosophila melanogaster]. Length 218 (1 .. 218)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  243 bits (621), Expect = 5e-64
Identities = 110/218 (50%), Positives = 155/218 (70%)





Query: 1   MNCRSEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSTGTVGTQDVDCDFI 60
           MN RS+V ++++EGRQV+EA+  + HTVL HR  GK+ Y  +  YS GTVG  DVDC+FI
Sbjct: 1   MNARSQVFDLTMEGRQVDEAVATIFHTVLFHRCLGKYMYTGDAQYSIGTVGYTDVDCNFI 60

Query: 61  DFTYVRVSSEELDRALRKVVGEFKDALRNSGGDGLGQMSLEFYQKKKSRWPFSDECIPWE 120
           DFTYV  +S+ L   +++ +  F + LR++   G GQ+SLEF+QKKK+RWPF  E IPWE
Sbjct: 61  DFTYVCCTSDSLTHKVKRAINSFSEKLRSNESCGSGQISLEFFQKKKNRWPFPQESIPWE 120

Query: 121 VWTVKVHVVALATEQERQICREKVGEKLCEKIINIVEVMNRHEYLPKMPTQSEVDNVFDT 180
           VWTV + ++    E ERQ+CRE V + L EK+I I E+MNRH+Y+PK P+QSE+D +FDT
Sbjct: 121 VWTVHLDLIKHENEDERQLCRENVSDLLTEKVIYITELMNRHDYVPKTPSQSELDLIFDT 180

Query: 181 GLRDVQPYLYKISFQITDALGTSVTTTMRRLIKDTLAL 218
              DVQPYL+K  +  + +   S+   M+++IK+TLA+
Sbjct: 181 SFPDVQPYLFKFDYSTSGSAAPSMGNAMKKIIKETLAM 218
CPU time:     0.04 user secs.	    0.02 sys. secs	    0.06 total secs.

Gapped
Lambda     K      H
   0.319    0.135    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 370
Number of Sequences: 0
Number of extensions: 26
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 218
length of database: 232,970,811
effective HSP length: 112
effective length of query: 106
effective length of database: 113,279,435
effective search space: 12007620110
effective search space used: 12007620110
T: 9
A: 40
X1: 16 ( 7.4 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)