NCBI logo

Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Jul-12-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_060863 - hypothetical protein FLJ11336 [Homo sapiens] Length 509 (1 .. 509)
Sequence 2 lcl|AAF46097 : CG16721 gene product [Drosophila melanogaster]. Length 494 (1 .. 494)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  226 bits (576), Expect = 4e-58
Identities = 153/480 (31%), Positives = 246/480 (50%), Gaps = 34/480 (7%)





Query: 33  DEALQKAIKSDSSSP----QRVQRPH--SSPPRFVTVEELLETARGVTNMALAHEIVVNG 86
           +E  ++ I++DS S      R   P    +PP+ VT++E+    + + NM LAHEI +N 
Sbjct: 18  EEHEERRIRTDSESSVESMTRFVLPSLDGTPPKIVTLDEVSSMFKNLRNMELAHEIALNP 77

Query: 87  DFQIKPVELPENSLKKRVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLL 146
           DF+++  E P +SL+  +K++VHKAFWD L VQL   PP+YD AI+L+ EIKE     L 
Sbjct: 78  DFKLQKYEPPSDSLEGAIKKMVHKAFWDLLRVQLDRQPPSYDQAIRLLAEIKECFPQLLS 137

Query: 147 PGHTRLRNQITEVLDLDLIKQEAENGALDISKLAEFIIGMMGTLCAPARDEEVKKLKDIK 206
           P + R    I EVLD  +I+Q+AE G LD    A F+I ++   C+PARDE V  L+ I 
Sbjct: 138 PNNERALAHINEVLDDSVIRQQAERGTLDFRAYANFVINILSRSCSPARDEAVAALRKID 197

Query: 207 EIVPLFREIFSVLDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILERQPNSLDFVTQ 266
           ++V  FR I  ++ LMK+DMANF +   R  +   SV+YE++KF + L     ++ F   
Sbjct: 198 DVVDTFRCILELMTLMKLDMANFMLRLARTEIAANSVQYEKEKFSKYLREFHGNVGF--- 254

Query: 267 WLEEASEDLMTQKYKHALPVGGMAAGSGDMPRLSPVAVQNYAYLKLLKWDHLQRPFPETV 326
               A+ED + Q+++         +GS D        + N AY++L+ +    + FPE +
Sbjct: 255 ---PATEDWL-QRHR---------SGSSD-----DETIYN-AYMQLIDYP-ADKEFPELL 294

Query: 327 LMDQSRFHXXXXXXXXXTILGAVLLVTFSMAAPGISSQADFAEKLKMIVKILLTDMHLPS 386
            +D+ RF           ++    L++ +   P IS + +   KL   + I++ D+    
Sbjct: 295 RIDKERF--AGLSWRAQRLILCASLISVAQGMPIISQRRENRIKLAQQLDIIVQDIKNQD 352

Query: 387 FHLKDVLTTIGEKVCLEVSSCLSLCGSSPFTTDKETVLKGQIQAVASPDDPIRRIMESRI 446
             +   + +  E++   V+  L        +   +  LK Q+  +A+   P+  +M  R+
Sbjct: 353 -QVASTIESCYEQIRSFVNKALEQENLPALSDADQAALKNQVLKLANKTSPVPSLMAKRL 411

Query: 447 LTFLETYLASGHQKPLPTVPGGLSPVQRELEEVAIKFARLVNYNKMVFCPYYDAILSKIL 506
             ++   L S    P P  P G +  Q EL      F RLV+YN  VF  ++  IL+K L
Sbjct: 412 DGYVRVTLRSNGSIPPP--PSGFADYQEELVAFIASFRRLVSYNHAVFGEHFHQILNKTL 469
CPU time:     0.11 user secs.	    0.01 sys. secs	    0.12 total secs.

Gapped
Lambda     K      H
   0.318    0.134    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1729
Number of Sequences: 0
Number of extensions: 169
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 509
length of database: 232,970,811
effective HSP length: 125
effective length of query: 384
effective length of database: 175,758,061
effective search space: 67491095424
effective search space used: 67491095424
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)