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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Jul-12-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|NP_057146 - CGI-128 protein [Homo sapiens] Length 163 (1 .. 163)
Sequence 2 lcl|AAF50128 - CG7949 gene product [Drosophila melanogaster]. Length 156 (1 .. 156)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  223 bits (568), Expect = 3e-58
Identities = 108/151 (71%), Positives = 130/151 (85%)





Query: 12  LENANPLIYQRSGERPVTAGEEDEQVPDSIDAREIFDLIRSINDPEHPLTLEELNVVEQV 71
           +EN NP +Y R  ER +TA EEDE VPD  D REIFDLIR+INDPEHPLTLEEL+VV++ 
Sbjct: 5   IENINPNVYDRIKERVLTANEEDENVPDPFDKREIFDLIRNINDPEHPLTLEELHVVQED 64

Query: 72  RVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEHA 131
            ++++D +++V ++FTPTIPHCSMATLIGLSI+VKLLRSLP RFK+ V ITPGTHASE A
Sbjct: 65  LIRINDSQNSVHISFTPTIPHCSMATLIGLSIRVKLLRSLPPRFKVTVEITPGTHASELA 124

Query: 132 VNKQLADKERVAAALENTHLLEVVNQCLSAR 162
           VNKQLADKERVAAALEN HL EV+NQC++A+
Sbjct: 125 VNKQLADKERVAAALENNHLAEVINQCIAAK 155
CPU time:     0.06 user secs.	    0.01 sys. secs	    0.07 total secs.

Gapped
Lambda     K      H
   0.315    0.131    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 284
Number of Sequences: 0
Number of extensions: 12
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 163
length of database: 232,970,811
effective HSP length: 106
effective length of query: 57
effective length of database: 81,468,403
effective search space: 4643698971
effective search space used: 4643698971
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)