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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Jul-12-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|BAA34496 - KIAA0776 protein [Homo sapiens] Length 799 (1 .. 799)
Sequence 2 lcl|AAF54073 - CG1104 gene product [Drosophila melanogaster]. Length 782 (1 .. 782)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  424 bits (1090), Expect = e-117
Identities = 252/754 (33%), Positives = 412/754 (54%), Gaps = 26/754 (3%)





Query: 6   MADAWEEIRRLAADFQRAQFAEATQRLSERNCIEIVNKLIAQKQLEVVHTLDGKEYITPA 65
           M   W+EI+RLAADFQ+AQ     Q+LSERNC+EIV  L+ ++ LEVV T DGKEYITP 
Sbjct: 1   MGSDWDEIKRLAADFQKAQLTSTLQKLSERNCVEIVTLLLEKQMLEVVFTNDGKEYITPD 60

Query: 66  QISKEMRDELHVRGGRVNIVDLQQVINVDLIHIENRIGDIIKSEKHVQLVLGQLIDENYL 125
            + +E++DEL+V GGR N+V++ + +NVDL  IE     I    + V LVLGQLIDE+Y+
Sbjct: 61  HLEREIQDELYVNGGRANLVEVSKTLNVDLSRIELLAERISAENQSVHLVLGQLIDEDYI 120

Query: 126 DRLAEEVNDKLQESGQVTISELCKTYDLPGNFLTQALTQR-LGRIISGHIDLDNRGVIFT 184
             +A+E+N+KL + G+V+ISEL   +DLP +FL   + ++ LG+II G  D  N  V FT
Sbjct: 121 SHIAQEINEKLVQRGEVSISELASQFDLPSDFLQHDVVEKHLGKIIKGRQDASNPRVFFT 180

Query: 185 EAFVARHKARIRGLFSAITRPTAVNSLISKYGFQEQLLYSVLEELVNSGRLRGTVVGGRQ 244
           +A++ R KA+IRG  +AITRP  V  ++ K G QE++ YS+L+E+  +G+     V  +Q
Sbjct: 181 QAYIQRCKAKIRGALAAITRPINVAVILQKIGVQEKIFYSLLDEIAPAGQ-----VTSKQ 235

Query: 245 DKAVFVPDIYSRTQSTWVDSFFRQNGYLEFDALSRLGIPDAVSYIKKRYKTTQLLFLKAA 304
             + +VP IY++TQ+ WV+SF++QN +LE+DA+ +LGI DA SYI+K++   + L+LK  
Sbjct: 236 ANSQYVPHIYAKTQADWVNSFYKQNSFLEYDAIQKLGISDAKSYIRKQFPNEEFLYLKRV 295

Query: 305 CVGQGLVD-QVEASVEEAISSGTWVDIAPLLPTSLSVEDAAILLQQVMRAFSKQAXXXXX 363
            +G  LV+  V  ++ E  ++  ++D+  +LP++LS ED   +   +M            
Sbjct: 296 ALGARLVELTVVTALNECSATKQYLDLTTILPSNLSEEDIEEVFSTIMAQKHSNPSNFVY 355

Query: 364 XXXXXXXEKFINDCTELFRELMHQKAEKEMKNNPV-HLITEEDLKQ---ISTLE-----S 414
                  + ++    +  + L   +A+  +        I E+ L Q   +ST E      
Sbjct: 356 LDGIVFSQPYLAQLVQPCQALAESQAKAAIDGGVYQQYIVEKTLAQKGNVSTQELEDEGK 415

Query: 415 VSTSXXXXXXXXXXXATEXXXXXXXXXXXNAREYXXXXXXXXXXXXXXXXXESQSSHTGK 474
           V              A               +                   +      G 
Sbjct: 416 VDKRDERRKKASSGKAGGGAQGRETKTKSTKKHQRGKAAAQFDSDDEDDAQQGSRGGGGA 475

Query: 475 KKPEISFMFQDEIEDFLRKHIQDAPEEFISEL----AEYLIKPLNKTYLEVVRSVFMSST 530
            K  +  +   +  D ++       EE +  L    A       N+T L   + +F ++ 
Sbjct: 476 SKKAVKPLELVKTADIVKLITASLEEEGLEHLSKSIASLYTNQFNQTALARAQELFEATP 535

Query: 531 TSASGTGRKRTIKDLQEEVSNLYNNIRLFEKGMKFFADDTQAALTKHLLKSVCTDITNLI 590
                T R++T   +Q+ ++ L  +IRL+EKG+K F  DTQ  L K+LLKS+  +I N +
Sbjct: 536 Q----TNRRQTHAAIQDRINTLLIDIRLYEKGLKLFPQDTQTQLVKYLLKSLGNEICNEL 591

Query: 591 FNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTKLHNSLNEKSIEDFISCLDSA 650
             ++AS+  + V +   +  + R K+  +   + + AL + + +LN KSI+DF    ++ 
Sbjct: 592 SLYVASECNLTVKN-TNLNVDQRNKLAQECEAQYRAALLEQNKALN-KSIDDFELATETV 649

Query: 651 AEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALILHLTSVLLFQFSTHSMLHAP 710
            + C +++K+ DKK++R ++  H++ L +QL    +PAL+LHL +++LF   T S+LHA 
Sbjct: 650 LKTCSMIIKKVDKKKDRLLIADHKKKLQKQLLECNEPALLLHLAALILFTTITGSILHAS 709

Query: 711 GRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQL 744
           G+ V  I+  +   + EDQ+ALL++Y  LV++ L
Sbjct: 710 GKFVSAILQHIRGSLNEDQNALLLRYHDLVLQVL 743
CPU time:     0.20 user secs.	    0.04 sys. secs	    0.24 total secs.

Gapped
Lambda     K      H
   0.317    0.133    0.359 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4905
Number of Sequences: 0
Number of extensions: 416
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 799
length of database: 233,138,231
effective HSP length: 129
effective length of query: 670
effective length of database: 195,497,708
effective search space: 130983464360
effective search space used: 130983464360
T: 9
A: 40
X1: 16 ( 7.3 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)