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Blast 2 Sequences results

PubMed Entrez BLAST OMIM Taxonomy Structure

BLAST 2 SEQUENCES RESULTS VERSION BLASTP 2.2.1 [Jul-12-2001]

Matrix gap open: gap extension:
x_dropoff: expect: wordsize: Filter
Sequence 1 lcl|XP_010660 - CGI-45 protein [Homo sapiens] Length 375 (1 .. 375)
Sequence 2 lcl|AAF56017 - CG5315 gene product [alt 1] [Drosophila melanogaster]. Length 322 (1 .. 322)



2 1

NOTE:The statistics (bitscore and expect value) is calculated based on the size of nr database

Score =  311 bits (796), Expect = 8e-84
Identities = 144/276 (52%), Positives = 183/276 (66%), Gaps = 2/276 (0%)





Query: 87  VWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHXXXXX 146
           VWE  W+V  Y  LP WL+DND+L  GHRPP+PSFRACFKSIFR+HTETGNIWTH     
Sbjct: 34  VWEASWKVCHYKNLPKWLQDNDFLHRGHRPPLPSFRACFKSIFRVHTETGNIWTHLLGCI 93

Query: 147 XXXXXXXXTMLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHTVYCHSEKVSRTFSK 206
                    + RP++      QEK+VFG FF+GA++CL FS+ FHT+ CHS ++ R FSK
Sbjct: 94  AFIGVALYFISRPSVEIQT--QEKIVFGAFFIGAIVCLGFSFAFHTLSCHSVEMGRLFSK 151

Query: 207 LDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWDRFATPKHRQT 266
           LDY GIALLIMGSFVPWLYY FYC  QP++IYLS+V +LGI +I+V+ WD+F+ P  R  
Sbjct: 152 LDYCGIALLIMGSFVPWLYYGFYCHYQPKVIYLSVVSILGILSIVVSLWDKFSEPALRPL 211

Query: 267 RAXXXXXXXXXXXXPTMHFTIAEGFVKATTVGQMGWFFLMAVMYITGAGLYAARIPERFF 326
           RA            P +H++I EG+    +   +GW  LM ++YI GA LYA R+PER+F
Sbjct: 212 RAGVFMSFGLSGVIPAIHYSIMEGWFSQMSRASLGWLILMGLLYILGALLYALRVPERWF 271

Query: 327 PGKFDIWFQSHQIXXXXXXXXXXXXXYGVSNLQEFR 362
           PGKFDIW QSHQI             +G+S +  +R
Sbjct: 272 PGKFDIWGQSHQIFHILVIAAAFVHYHGISEMAMYR 307
CPU time:     0.06 user secs.	    0.04 sys. secs	    0.10 total secs.

Gapped
Lambda     K      H
   0.327    0.141    0.466 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 855
Number of Sequences: 0
Number of extensions: 66
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 375
length of database: 233,138,231
effective HSP length: 121
effective length of query: 254
effective length of database: 157,912,410
effective search space: 40109752140
effective search space used: 40109752140
T: 9
A: 40
X1: 15 ( 7.1 bits)
X2: 129 (49.7 bits)
X3: 129 (49.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)